iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Protein
Gene
Annotation
Classification
Domain Profile
Function
Protein Sequence
Nucleotide Sequence
Keyword
GO
Orthology
TOP

Tag

Content

UUCD2 ID

IUUC-Bdi-014787

UUCD1 version

Ensembl Protein ID

UniProt Accession

Genbank Protein ID

Protein Name

Uncharacterized protein

Genbank Nucleotide ID

CM000883

Gene Name

BRADI_4g13960

Ensembl Information

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
BRADI4G13960	BRADI4G13960.1	BRADI4G13960.1

Status

Unreviewed

Classification

Family	E-Value	Score	Start	End
E3 activity/RING/RING	3.20e-08	34.5	194	236

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Domain Profile

E3 activity/RING/RING

   S: 1    CaiCledfkdg..plvlp.CgHvfhadClqkwpglknssskefrCPlCr 46
           Ca+Cl +f+dg  +++lp CgH+fh+ C+  w       + + +CPlCr
   Q: 194  CAVCLAEFRDGetLRLLPrCGHAFHRGCIDVW------LRAHVNCPLCR 236
           ********66666999999*************......**********8 PP

Organism

Brachypodium distachyon

Protein Sequence
(Fasta)

MPPPEHPLPG PNPKPKPPKP KPPKPRPEPL RDHVAVPEVP FPPDHFACAS RCTDRCAHHG 60
LCAPLPPPAA TVHLRSSSSS RLPTPLIALS ASVLAASALL LVILLVCHLL RRRRQRQSAA 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

CTAAAAAATC TCCATAAAAA TCCACGGAGA TGTTAACGTG ACTGCTTTCT GGCCGGTCAT 60
CCCTTCCACG ACAAGTCTAG CCTCACGAGT CACGACTCAC CACCGCCTTT CACCTTCCTT 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0181--Complete proteome
KW-0472--Membrane
KW-1185--Reference proteome
KW-0812--Transmembrane
KW-1133--Transmembrane helix

Interpro

IPR001841--Znf_RING
IPR013083--Znf_RING/FYVE/PHD

PROSITE

PS50089--ZF_RING_2

Pfam

PF13639--zf-RING_2

SMART

SM00184--RING

Gene Ontology

GO:0016021--C:integral component of membrane
GO:0061630--F:ubiquitin protein ligase activity
GO:0008270--F:zinc ion binding
GO:0043161--P:proteasome-mediated ubiquitin-dependent protein catabolic process

KEGG

bdi:100833107

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Hvu-047548	Hordeum vulgare	60.12	1.00e-71	262.00
IUUC-Lpe-051021	Leersia perrieri	58.54	8.00e-50	190.00
IUUC-Ogl-077549	Oryza glaberrima	54.11	2.00e-35	142.00
IUUC-Ogu-078888	Oryza glumaepatula	77.42	6.00e-36	144.00
IUUC-Ome-081161	Oryza meridionalis	60.91	9.00e-55	206.00
IUUC-Oni-082446	Oryza nivara	62.20	7.00e-54	203.00
IUUC-Opu-083814	Oryza punctata	53.85	2.00e-60	225.00
IUUC-Oru-084508	Oryza rufipogon	60.26	2.00e-55	208.00
IUUC-Osa-086278	Oryza sativa	61.61	2.00e-52	198.00
IUUC-Sit-110395	Setaria italica	56.28	1.00e-37	149.00
IUUC-Sbi-114179	Sorghum bicolor	56.12	5.00e-43	167.00
IUUC-Tae-124813	Triticum aestivum	60.29	9.00e-74	269.00

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence