iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Protein
Gene
Annotation
Classification
Domain Profile
Function
Protein Sequence
Nucleotide Sequence
Keyword
GO
Orthology
TOP

Tag

Content

iUUCD ID

IUUC-Ata-000091

Ensembl Protein ID

EMT14465

UniProt Accession

N1QWY6; N1QWY6_AEGTA

Genbank Protein ID

EMT14465.1

Protein Name

General transcription factor 3C polypeptide 2

Genbank Nucleotide ID

KD543716

Gene Name

F775_20910

Ensembl Information

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
F775_20910	EMT14465	EMT14465

Status

Unreviewed

Classification

Family	E-Value	Score	Start	End
E3 adaptor/Cullin RING/DCX/DWD	6.20e-08	33.4	813	842

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Domain Profile

E3 adaptor/Cullin RING/DCX/DWD

   S: 9    laf...sdtllvsGsdDgtikvWDlrtgvl 35
           +++   + +++++G++Dgt+ +W ++t+ +
   Q: 813  VDWspyPHDMILAGCHDGTVALWKFSTDLP 842
           789977669***************999876 PP

Organism

Aegilops tauschii

Protein Sequence
(Fasta)

MAAPPETTGA PSPPEGEHKG NAGVEVCCFE QSAEDFSRAV RAISELAAGE PEPGFPDAEA 60
ERLASSITFL SSDFVLFAGG NVWSLDWCPR LCDKPSSPYL AVAAHPPGSS YHKIGMPLIG 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

ATGGCCGCGC CGCCGGAGAC GACGGGCGCG CCGTCCCCGC CGGAAGGGGA GCACAAGGGC 60
AACGCGGGCG TCGAGGTCTG CTGCTTCGAG CAATCTGCAG AGGACTTCTC CAGAGCGGTA 120

It may take some time, please wait.

Sequence Source

Ensembl

Interpro

IPR017956--AT_hook_DNA-bd_motif
IPR015943--WD40/YVTN_repeat-like_dom
IPR001680--WD40_repeat
IPR017986--WD40_repeat_dom

PRINTS

PR00929--ATHOOK

SMART

SM00384--AT_hook
SM00320--WD40

Gene Ontology

GO:0003677--F:DNA binding

KEGG

ats:F775_20910

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Aml-001488	Ailuropoda melanoleuca	22.02	2.00e-12	67.80
IUUC-Ath-006785	Arabidopsis thaliana	46.02	7.00e-118	417.00
IUUC-Bta-012551	Bos taurus	26.49	1.00e-11	64.70
IUUC-Bdi-014228	Brachypodium distachyon	71.53	0.00e+00	1420.00
IUUC-Bol-015619	Brassica oleracea	45.56	5.00e-126	444.00
IUUC-Bra-017820	Brassica rapa	44.78	5.00e-127	447.00
IUUC-Cja-019727	Callithrix jacchus	28.11	3.00e-12	67.00
IUUC-Cfa-020469	Canis familiaris	27.03	7.00e-12	65.50
IUUC-Cpo-021854	Cavia porcellus	27.57	3.00e-11	63.50
IUUC-Csa-023726	Chlorocebus sabaeus	28.11	2.00e-12	67.40
IUUC-Cho-024296	Choloepus hoffmanni	31.50	1.00e-11	65.10
IUUC-Dor-030617	Dipodomys ordii	26.07	4.00e-16	79.70
IUUC-Ete-032340	Echinops telfairi	30.77	2.00e-05	43.50
IUUC-Eca-033420	Equus caballus	26.84	3.00e-12	67.00
IUUC-Eeu-035060	Erinaceus europaeus	22.22	4.00e-07	49.70
IUUC-Fca-035603	Felis catus	28.65	2.00e-12	67.40
IUUC-Ggo-045595	Gorilla gorilla	28.11	2.00e-12	67.40
IUUC-Hsa-046196	Homo sapiens	28.11	2.00e-12	67.40
IUUC-Hvu-047758	Hordeum vulgare	84.81	0.00e+00	1896.00
IUUC-Itr-048222	Ictidomys tridecemlineatus	27.57	7.00e-12	65.90
IUUC-Lpe-050995	Leersia perrieri	55.01	0.00e+00	692.00
IUUC-Mcc-055795	Macaca mulatta	28.11	2.00e-12	67.40
IUUC-Mmr-061702	Microcebus murinus	27.90	1.00e-12	68.20
IUUC-Mdo-063012	Monodelphis domestica	28.39	8.00e-13	68.90
IUUC-Mmu-063858	Mus musculus	30.15	3.00e-11	63.50
IUUC-Mpu-066147	Mustela putorius furo	30.84	7.00e-08	52.40
IUUC-Mlu-067530	Myotis lucifugus	25.79	2.00e-11	63.90
IUUC-Nle-069278	Nomascus leucogenys	28.11	2.00e-12	67.40
IUUC-Opr-070222	Ochotona princeps	27.57	2.00e-12	67.40
IUUC-Oan-073357	Ornithorhynchus anatinus	33.82	5.00e-12	65.10
IUUC-Ocu-074887	Oryctolagus cuniculus	27.03	1.00e-11	65.10
IUUC-Obr-076376	Oryza brachyantha	50.42	0.00e+00	800.00
IUUC-Ogl-077258	Oryza glaberrima	60.34	0.00e+00	800.00
IUUC-Ogu-078002	Oryza glumaepatula	58.30	2.00e-160	558.00
IUUC-Oin-079689	Oryza indica	52.22	0.00e+00	1048.00
IUUC-Olo-080486	Oryza longistaminata	42.01	2.00e-132	466.00
IUUC-Oni-082369	Oryza nivara	50.47	0.00e+00	1020.00
IUUC-Opu-083230	Oryza punctata	52.98	0.00e+00	1073.00
IUUC-Osa-085403	Oryza sativa	50.76	0.00e+00	776.00
IUUC-Ola-087512	Oryzias latipes	33.63	4.00e-09	55.10
IUUC-Oga-088051	Otolemur garnettii	29.19	4.00e-13	69.70
IUUC-Oar-090076	Ovis aries	27.03	4.00e-12	66.20
IUUC-Ptr-091503	Pan troglodytes	28.11	2.00e-12	67.40
IUUC-Pan-092123	Papio anubis	28.11	2.00e-12	67.40
IUUC-Ppa-095644	Physcomitrella patens	40.08	1.00e-55	209.00
IUUC-Pab-097532	Pongo abelii	28.11	2.00e-12	67.40
IUUC-Pop-099342	Populus trichocarpa	48.09	1.00e-124	440.00
IUUC-Pca-100255	Procavia capensis	30.88	1.00e-11	64.70
IUUC-Ppe-101268	Prunus persica	51.20	2.00e-109	389.00
IUUC-Pva-102403	Pteropus vampyrus	28.11	1.00e-12	68.20
IUUC-Rno-105329	Rattus norvegicus	30.15	3.00e-11	63.50
IUUC-Sha-106857	Sarcophilus harrisii	29.66	2.00e-13	70.90
IUUC-Sit-110532	Setaria italica	57.59	3.00e-158	551.00
IUUC-Sly-110922	Solanum lycopersicum	48.57	3.00e-117	415.00
IUUC-Sar-113690	Sorex araneus	30.00	1.00e-07	50.80
IUUC-Sbi-114680	Sorghum bicolor	47.79	0.00e+00	771.00
IUUC-Tgu-117058	Taeniopygia guttata	30.71	3.00e-10	58.50
IUUC-Tsy-119606	Tarsius syrichta	27.94	5.00e-07	49.30
IUUC-Tae-124395	Triticum aestivum	90.06	0.00e+00	2036.00
IUUC-Tur-126862	Triticum urartu	92.34	0.00e+00	2047.00
IUUC-Tbe-127727	Tupaia belangeri	29.11	1.00e-11	64.70
IUUC-Ttr-128425	Tursiops truncatus	27.03	5.00e-12	65.90
IUUC-Vpa-130050	Vicugna pacos	27.57	8.00e-12	65.50
IUUC-Vvi-131706	Vitis vinifera	53.02	3.00e-112	399.00

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence