iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Protein
Gene
Annotation
Classification
Domain Profile
Function
Protein Sequence
Nucleotide Sequence
Keyword
GO
Orthology
TOP

Tag

Content

iUUCD ID

IUUC-Tae-124170

Ensembl Protein ID

TRIAE_CS42_1BS_TGACv1_050570_AA0173470.1

UniProt Accession

W5AA79; W5AA79_WHEAT

Genbank Protein ID

AIG51274.1

Protein Name

R1 protein

Genbank Nucleotide ID

KJ472832

Gene Name

Ensembl Information

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
TRIAE_CS42_1BS_TGACv1_050570_AA0173470	TRIAE_CS42_1BS_TGACv1_050570_AA0173470.1	TRIAE_CS42_1BS_TGACv1_050570_AA0173470.1

Status

Unreviewed

Classification

Family	E-Value	Score	Start	End
E3 activity/RING/PHD	1.30e-07	34.3	202	253

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Domain Profile

E3 activity/RING/PHD

   S: 2    kvClvCgeggedekslveCekCrewfHpaClklsveeelpnsekwiCpkCrsk 54
           + C  Cg  ++ e+  + C+ C++w+H +C+k++   + ++ +++ Cp+C+sk
   Q: 202  TLCGTCGGIYSAEEFWIGCDVCERWYHGKCVKIT-PAKAESIKQYKCPSCSSK 253
           689*******************************.888888889******975 PP

Organism

Triticum aestivum

Protein Sequence
(Fasta)

MDASYRRSGA GGGGGSAPRT VEDIFKDYRA RRNAIHRALT HDVEEFYAQC DPEKENLCLY 60
GYANEAWEVA LPAEEVPTEL PEPALGINFA RDGMKRSDWL ALVAVHSDSW LVSVAFYYAA 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

ACCGCGTCTT CGTTTTCCGC CCCACTTAGC CTGGCTAGCT GGAAACGACC GATTCGAGCG 60
TTCCCAGCGA GCCAGGCTGA GGGGTGCTTT AAGGTCCGTG CAGATGCGAG CCAGGCCGGC 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0181--Complete proteome
KW-0479--Metal-binding
KW-1185--Reference proteome
KW-0862--Zinc
KW-0863--Zinc-finger

Interpro

IPR021998--Alfin
IPR019786--Zinc_finger_PHD-type_CS
IPR011011--Znf_FYVE_PHD
IPR001965--Znf_PHD
IPR019787--Znf_PHD-finger
IPR013083--Znf_RING/FYVE/PHD

PROSITE

PS01359--ZF_PHD_1
PS50016--ZF_PHD_2

Pfam

PF12165--Alfin
PF00628--PHD

SMART

SM00249--PHD

Gene Ontology

GO:0008270--F:zinc ion binding
GO:0006355--P:regulation of transcription, DNA-templated

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Ata-001165	Aegilops tauschii	90.35	2.00e-119	422.00
IUUC-Atr-002475	Amborella trichopoda	64.46	7.00e-80	290.00
IUUC-Bdi-014258	Brachypodium distachyon	91.67	4.00e-123	434.00
IUUC-Cin-025225	Ciona intestinalis	42.55	1.00e-08	56.20
IUUC-Cne-026898	Cryptococcus neoformans	47.50	2.00e-06	48.90
IUUC-Hvu-047100	Hordeum vulgare	99.22	6.00e-137	480.00
IUUC-Mtr-058517	Medicago truncatula	63.60	2.00e-75	275.00
IUUC-Mac-064648	Musa acuminata	71.67	3.00e-87	315.00
IUUC-Oba-075021	Oryza barthii	81.14	3.00e-109	388.00
IUUC-Ogu-079021	Oryza glumaepatula	80.99	5.00e-109	387.00
IUUC-Ome-081881	Oryza meridionalis	87.55	7.00e-113	400.00
IUUC-Opu-083359	Oryza punctata	86.87	9.00e-112	396.00
IUUC-Oru-085108	Oryza rufipogon	85.42	1.00e-98	352.00
IUUC-Ppa-095988	Physcomitrella patens	58.89	1.00e-80	293.00
IUUC-Smo-108937	Selaginella moellendorffii	49.17	1.00e-52	199.00
IUUC-Sly-111705	Solanum lycopersicum	62.34	3.00e-75	275.00
IUUC-Tca-121204	Theobroma cacao	68.62	1.00e-77	283.00

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence