iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Protein
Gene
Annotation
Classification
Domain Profile
Function
Protein Sequence
Nucleotide Sequence
Keyword
GO
Orthology
TOP

Tag

Content

UUCD2 ID

IUUC-Bdi-014768

UUCD1 version

Ensembl Protein ID

UniProt Accession

Genbank Protein ID

Protein Name

RING-type E3 ubiquitin transferase

Genbank Nucleotide ID

CM000882

Gene Name

LOC100845004; BRADI_3g36090

Ensembl Information

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
BRADI3G36090	BRADI3G36090.1	BRADI3G36090.1

Status

Unreviewed

Classification

Family	E-Value	Score	Start	End
E3 activity/RING/U-box	1.90e-13	50.8	41	112

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Domain Profile

E3 activity/RING/U-box

   S: 2    vpeeflCpIslelMrdPvvlpsGitydrssIekwlasggktcPvtrqpl..teedl.vPnltlrrliqawceen 72
           +p eflCpI + +M dPv+lpsG ty+r++++ + + +    P  ++p       + +Pn +lr+ i  w+ ++
   Q: 41   LPREFLCPILGAPMADPVILPSGRTYERACVQACAELSLC-PPGEDAPGagGAG-VaIPNDALRAAIRTWRTRS 112
           799*******************************666654.5555566542333.35*************9886 PP

Organism

Brachypodium distachyon

Protein Sequence
(Fasta)

MGAPRARRWK LLPFHSKAKP PPPPLPVPAA LLGKEQEEEE LPREFLCPIL GAPMADPVIL 60
PSGRTYERAC VQACAELSLC PPGEDAPGAG GAGVAIPNDA LRAAIRTWRT RSGRAPPAAP 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

ATGGGTGCAC CGCGCGCACG GCGCTGGAAG CTTCTGCCCT TCCACTCCAA GGCCAAGCCG 60
CCGCCGCCGC CGCTGCCGGT CCCTGCAGCT CTGTTGGGGA AAGAACAGGA GGAGGAGGAG 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0181--Complete proteome
KW-1185--Reference proteome
KW-0808--Transferase

Interpro

IPR011989--ARM-like
IPR016024--ARM-type_fold
IPR000225--Armadillo
IPR003613--Ubox_domain
IPR013083--Znf_RING/FYVE/PHD

PROSITE

PS50176--ARM_REPEAT
PS51698--U_BOX

Pfam

PF00514--Arm
PF04564--U-box

SMART

SM00185--ARM
SM00504--Ubox

Gene Ontology

GO:0005737--C:cytoplasm
GO:0005634--C:nucleus
GO:0004842--F:ubiquitin-protein transferase activity

KEGG

bdi:100845004

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Hvu-047842	Hordeum vulgare	75.79	3.00e-129	454.00
IUUC-Lpe-050747	Leersia perrieri	60.58	6.00e-60	224.00
IUUC-Ogl-077581	Oryza glaberrima	69.08	1.00e-89	322.00
IUUC-Ogu-078609	Oryza glumaepatula	69.08	2.00e-89	322.00
IUUC-Oin-080137	Oryza indica	69.08	1.00e-89	323.00
IUUC-Olo-080764	Oryza longistaminata	68.98	1.00e-90	325.00
IUUC-Ome-081335	Oryza meridionalis	71.01	6.00e-92	330.00
IUUC-Oni-082981	Oryza nivara	69.08	1.00e-89	323.00
IUUC-Oru-084602	Oryza rufipogon	69.57	4.00e-97	347.00
IUUC-Osa-086111	Oryza sativa	69.57	4.00e-97	347.00
IUUC-Sit-110542	Setaria italica	68.29	3.00e-72	265.00
IUUC-Sbi-114598	Sorghum bicolor	64.81	6.00e-57	214.00
IUUC-Tae-123952	Triticum aestivum	82.72	1.00e-109	389.00

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence