iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Protein
Gene
Annotation
Classification
Domain Profile
Function
Protein Sequence
Nucleotide Sequence
Keyword
GO
Orthology
TOP

Tag

Content

UUCD2 ID

IUUC-Sbi-114348

UUCD1 version

UUC-SoB-00242

Ensembl Protein ID

Sb01g033170.1

UniProt Accession

A0A1B6QMR3; A0A1B6QMR3_SORBI

Genbank Protein ID

KXG39195.1

Protein Name

Uncharacterized protein

Genbank Nucleotide ID

CM000760

Gene Name

SORBI_001G345900

Ensembl Information

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
Sb01g033170	Sb01g033170.1	Sb01g033170.1

Status

Unreviewed

Classification

Family	E-Value	Score	Start	End
E3 activity/RING/RING	8.10e-10	39.9	60	108

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Domain Profile

E3 activity/RING/RING

   S: 1    CaiCledf........kdgplvlp.CgHvfhadClqkwpglknssskefrCPlCr 46
           Ca+Cl+++        +  ++ lp CgH+fhadC+ +w         +  CPlCr
   Q: 60   CAVCLSELpagagsrpQAAVRALPaCGHAFHADCIGRW------LPLRPECPLCR 108
           ********88777665333999****************......**********8 PP

Organism

Sorghum bicolor

Protein Sequence
(Fasta)

MAAVAGAVTL TIAAACTAAV LSLASSSSSS DDEARTRSVA TSGAEAGSPL PAPPSSHHEC 60
AVCLSELPAG AGSRPQAAVR ALPACGHAFH ADCIGRWLPL RPECPLCRRP VLLAAGGQQA 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

ATGGCCGCCG TCGCGGGCGC CGTGACCCTG ACCATAGCCG CCGCCTGCAC GGCGGCCGTT 60
CTGTCCCTAG CGTCGTCGTC GTCGTCGTCC GATGATGAGG CCCGCACCCG CAGCGTCGCC 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0181--Complete proteome
KW-1185--Reference proteome

Interpro

IPR001841--Znf_RING
IPR013083--Znf_RING/FYVE/PHD

PROSITE

PS50089--ZF_RING_2

Pfam

PF13639--zf-RING_2

SMART

SM00184--RING

Gene Ontology

GO:0008270--F:zinc ion binding

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Ata-000132	Aegilops tauschii	60.00	3.00e-07	47.00
IUUC-Hvu-047401	Hordeum vulgare	43.27	4.00e-08	50.10
IUUC-Lpe-051046	Leersia perrieri	56.70	1.00e-20	90.90
IUUC-Oba-075015	Oryza barthii	67.92	2.00e-14	70.50
IUUC-Ogl-077623	Oryza glaberrima	59.43	2.00e-22	97.10
IUUC-Ogu-078342	Oryza glumaepatula	57.55	3.00e-19	86.30
IUUC-Oin-079717	Oryza indica	56.60	3.00e-19	86.30
IUUC-Oni-082880	Oryza nivara	59.22	1.00e-19	87.40
IUUC-Oru-084971	Oryza rufipogon	58.10	2.00e-19	86.70
IUUC-Osa-085733	Oryza sativa	58.10	2.00e-19	86.70
IUUC-Pgr-103574	Puccinia graminis	37.74	1.00e-07	49.70
IUUC-Sit-110420	Setaria italica	55.64	4.00e-12	63.20
IUUC-Tae-123194	Triticum aestivum	39.17	2.00e-12	63.50

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence