iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Protein
Gene
Annotation
Classification
Domain Profile
Function
Protein Sequence
Nucleotide Sequence
Keyword
GO
Orthology
TOP

Tag

Content

iUUCD ID

IUUC-Gma-043010

Ensembl Protein ID

GLYMA10G30440.3

UniProt Accession

C6TIB0; C6TIB0_SOYBN

Genbank Protein ID

ACU21611.1; KRH34089.1

Protein Name

Auxin-induced protein

Genbank Nucleotide ID

BT097390; CM000843

Gene Name

LOC100781847; GLYMA_10G162400

Ensembl Information

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
GLYMA10G30440	GLYMA10G30440.4	GLYMA10G30440.4
GLYMA10G30440	GLYMA10G30440.3	GLYMA10G30440.3

Status

Unreviewed

Classification

Family	E-Value	Score	Start	End
ULD/UDP/UFD/PB1	6.20e-16	60.0	115	212

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Domain Profile

ULD/UDP/UFD/PB1

   S: 3    rvkvsykgeirsfaldlekpgkfedLlkavrt.lt.......................elknsevalkYeDedGDlvtlksDedldkavsllas 72
           +vkvs++g+++++++d + + ++++L +a+++ +                         l++s++ ++Y+D+dGD++ l++D++++++v+    
   Q: 115  FVKVSMDGAPYLRKVDIKLYKSYQELSDALAKmFSsftiekcgsqgmkdfmnetklidLLNGSDYVPTYQDKDGDWM-LVGDVPWEMFVE---- 203
           8*******************************622566999****************99999***************.************.... PP
   S: 73   kksllrlliqk 83
             s+ rl+i+k
   Q: 204  --SCQRLRIMK 212
           ..*******98 PP

Organism

Glycine max

Functional Description
(View)

Aux/IAA proteins are short-lived transcriptional factors that function as repressors of early auxin response genes at low auxin concentrations.

Protein Sequence
(Fasta)

MINFEETELR LGLPGGSASD HNESTTVKGS GGKRGFSETA SVDLKLNLSS SDDSASDSPS 60
SASTEKTTTA APPPPSRAND PAKPPAKAQV VGWPPVRSFR KNIVQRNKNE EEAAFVKVSM 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

CGTGACGTCA CCACCCGACA ACCCACGGAT GATCCAACAA CGGAAAACCG CAACACGTGG 60
CAGCATCTTA GCGGCGCGGT TCCCTCGCCC CACTGCACCC CATATTATTA TCACCAAAAC 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0927--Auxin signaling pathway
KW-0181--Complete proteome
KW-0539--Nucleus
KW-1185--Reference proteome
KW-0678--Repressor
KW-0804--Transcription
KW-0805--Transcription regulation

Interpro

IPR033389--AUX/IAA_dom
IPR003311--AUX_IAA
IPR000270--PB1_dom

PROSITE

PS51745--PB1

Pfam

PF02309--AUX_IAA

Gene Ontology

GO:0005634--C:nucleus
GO:0009734--P:auxin-activated signaling pathway
GO:0006355--P:regulation of transcription, DNA-templated
GO:0006351--P:transcription, DNA-templated

KEGG

gmx:100781847

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Bol-016371	Brassica oleracea	63.20	7.00e-75	273.00
IUUC-Hvu-047087	Hordeum vulgare	78.52	7.00e-68	248.00
IUUC-Mtr-058641	Medicago truncatula	70.92	3.00e-90	324.00
IUUC-Ont-072310	Oreochromis niloticus	21.88	7.70e-01	28.50
IUUC-Obr-076745	Oryza brachyantha	58.50	1.00e-69	255.00
IUUC-Olo-080519	Oryza longistaminata	61.15	4.00e-44	171.00
IUUC-Pop-099218	Populus trichocarpa	71.78	7.00e-88	316.00
IUUC-Pva-102267	Pteropus vampyrus	22.73	1.00e+00	27.70
IUUC-Sly-111769	Solanum lycopersicum	68.46	7.00e-85	306.00
IUUC-Stu-112038	Solanum tuberosum	68.62	2.00e-84	305.00
IUUC-Tca-121532	Theobroma cacao	70.97	3.00e-90	324.00
IUUC-Tae-122725	Triticum aestivum	74.70	3.00e-66	244.00

Created Date

25-Jun-2017

Functional Description

Protein Fasta Sequence

Nucleotide Fasta Sequence