iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Protein
Gene
Annotation
Classification
Domain Profile
Function
Protein Sequence
Nucleotide Sequence
Keyword
GO
Orthology
TOP

Tag

Content

iUUCD ID

IUUC-Ogu-078911

Ensembl Protein ID

OGLUM12G19630.1

UniProt Accession

A0A0E0BUW6; A0A0E0BUW6_9ORYZ

Protein Name

Auxin-responsive protein

Ensembl Information

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
OGLUM12G19630	OGLUM12G19630.1	OGLUM12G19630.1

Status

Unreviewed

Classification

Family	E-Value	Score	Start	End
ULD/UDP/UFD/PB1	2.40e-16	60.8	165	261

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Domain Profile

ULD/UDP/UFD/PB1

   S: 3    rvkvsykgeirsfaldlekpgkfedLlkavrt.lt......................elknsevalkYeDedGDlvtlksDedldkavsllask 73
           +vkvs++g+++++++dl+ + ++ +L ka+++ +                        l++se+ ++YeD+dGD++ l++D++++++v+     
   Q: 165  FVKVSMDGAPYLRKVDLKMYKSYLELSKALEKmFSsftigncgshgvngmneskiadLLNGSEYVPTYEDKDGDWM-LVGDVPWEMFVE----- 252
           8*******************************6225669999**************99999***************.************..... PP
   S: 74   ksllrlliqk 83
            s++rl+i+k
   Q: 253  -SCKRLRIMK 261
           .********8 PP

Organism

Oryza glumaepatula

Functional Description
(View)

Aux/IAA proteins are short-lived transcriptional factors that function as repressors of early auxin response genes at low auxin concentrations.

Protein Sequence
(Fasta)

MAADLAFEAT ELRLGLPGGG GGGDGDAAAA AARSSSGKRG FAETIDLKLK LEPAAAAVDD 60
DDDKEEGAAD GREKKVDIVG ADNDDASPPA AAAAGGMKRS PSQSSVVTAA ADPEKPRAPK 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

ATGGCGGCGG ACCTGGCCTT CGAGGCGACC GAGCTCCGGC TCGGCCTGCC CGGCGGCGGC 60
GGCGGCGGTG ATGGAGACGC GGCGGCGGCG GCGGCGAGGA GCTCCTCCGG GAAGAGGGGC 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0927--Auxin signaling pathway
KW-0181--Complete proteome
KW-0539--Nucleus
KW-1185--Reference proteome
KW-0678--Repressor
KW-0804--Transcription
KW-0805--Transcription regulation

Interpro

IPR033389--AUX/IAA_dom
IPR003311--AUX_IAA
IPR000270--PB1_dom

PROSITE

PS51745--PB1

Pfam

PF02309--AUX_IAA

Gene Ontology

GO:0005634--C:nucleus
GO:0009734--P:auxin-activated signaling pathway
GO:0006355--P:regulation of transcription, DNA-templated
GO:0006351--P:transcription, DNA-templated

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Atr-002559	Amborella trichopoda	57.95	3.00e-77	280.00
IUUC-Aca-004830	Anolis carolinensis	32.08	1.20e-01	29.60
IUUC-Aly-005642	Arabidopsis lyrata	55.76	2.00e-63	234.00
IUUC-Ath-007356	Arabidopsis thaliana	70.12	6.00e-60	223.00
IUUC-Bdi-014859	Brachypodium distachyon	66.20	3.00e-83	300.00
IUUC-Bol-016371	Brassica oleracea	71.70	6.00e-61	226.00
IUUC-Bra-017171	Brassica rapa	55.40	6.00e-70	256.00
IUUC-Gma-043268	Glycine max	56.23	6.00e-70	256.00
IUUC-Hvu-047087	Hordeum vulgare	79.50	2.00e-70	257.00
IUUC-Lpe-050724	Leersia perrieri	55.65	6.00e-53	199.00
IUUC-Mtr-058641	Medicago truncatula	58.06	8.00e-70	256.00
IUUC-Mac-065450	Musa acuminata	62.25	7.00e-75	272.00
IUUC-Oba-075945	Oryza barthii	93.21	2.00e-99	354.00
IUUC-Obr-076745	Oryza brachyantha	67.61	2.00e-87	314.00
IUUC-Oin-079136	Oryza indica	89.64	2.00e-98	350.00
IUUC-Olo-080519	Oryza longistaminata	55.13	2.00e-42	164.00
IUUC-Oni-082674	Oryza nivara	93.57	1.00e-95	341.00
IUUC-Osa-086164	Oryza sativa	89.64	2.00e-98	350.00
IUUC-Ppa-095740	Physcomitrella patens	43.60	5.00e-30	125.00
IUUC-Pop-099218	Populus trichocarpa	60.16	7.00e-72	262.00
IUUC-Ppe-101719	Prunus persica	58.30	2.00e-68	251.00
IUUC-Smo-109586	Selaginella moellendorffii	47.80	7.00e-36	144.00
IUUC-Sit-110063	Setaria italica	70.63	5.00e-94	336.00
IUUC-Sly-111769	Solanum lycopersicum	56.47	8.00e-73	266.00
IUUC-Stu-112038	Solanum tuberosum	56.12	8.00e-72	262.00
IUUC-Sbi-114725	Sorghum bicolor	68.55	8.00e-82	296.00
IUUC-Tca-121532	Theobroma cacao	59.57	4.00e-75	273.00
IUUC-Tae-124253	Triticum aestivum	66.08	3.00e-81	293.00
IUUC-Tur-126762	Triticum urartu	63.57	5.00e-75	273.00
IUUC-Vvi-131523	Vitis vinifera	57.72	8.00e-69	252.00

Created Date

25-Jun-2017

Functional Description

Protein Fasta Sequence

Nucleotide Fasta Sequence