iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Protein
Gene
Annotation
Classification
Domain Profile
Function
Protein Sequence
Nucleotide Sequence
Keyword
GO
Orthology
TOP

Tag

Content

iUUCD ID

IUUC-Tca-121261

Ensembl Protein ID

EOX94578

UniProt Accession

A0A061DX40; A0A061DX40_THECC

Genbank Protein ID

EOX94578.1

Protein Name

Auxin-responsive protein

Genbank Nucleotide ID

CM001879

Gene Name

TCM_004212

Ensembl Information

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
TCM_004212	EOX94579	EOX94579
TCM_004212	EOX94578	EOX94578

Status

Unreviewed

Classification

Family	E-Value	Score	Start	End
ULD/UDP/UFD/PB1	1.40e-16	61.4	189	286

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Domain Profile

ULD/UDP/UFD/PB1

   S: 3    rvkvsykgeirsfaldlekpgkfedLlkavrt.lt.......................elknsevalkYeDedGDlvtlksDedldkavsllaskksllrl 79
           +vkvs++g+++++++dl+ + ++ +L +a+++ +                         l++s++ ++YeD+dGD++ l++D+++d++v+      s++rl
   Q: 189  FVKVSMDGAPYLRKVDLRMYKTYLELSDALAKmFSsftigncgsqgvkdfmnesklmdLLNGSDYVPTYEDKDGDWM-LVGDVPWDMFVE------SCKRL 282
           8*******************************6225669999***************99999***************.************......***** PP
   S: 80   liqk 83
           +i+k
   Q: 283  RIMK 286
           ***8 PP

Organism

Theobroma cacao

Functional Description
(View)

Aux/IAA proteins are short-lived transcriptional factors that function as repressors of early auxin response genes at low auxin concentrations.

Protein Sequence
(Fasta)

MPNTPLFFAD VAIALTISQT PLLLRPFSLY FFTFISKHQT NSKTTKPKPR YTRLQKKIKE 60
RKAMGVGLKL GKGGGDVGGE KAKMGFEETE LRLGLPGNIR AGEGEVARKR GFSETVDLKL 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

GCTTCCTCTT AAAATACTTT GTTATATCTA AAATTAAAAT ATAATTAATG AAGGACACGT 60
TTTGATAAAA AAAAAAAAGA AGATTATATA AAAAATTAAA AAATTACTAC CATCCCCAAT 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0927--Auxin signaling pathway
KW-0181--Complete proteome
KW-0539--Nucleus
KW-1185--Reference proteome
KW-0678--Repressor
KW-0804--Transcription
KW-0805--Transcription regulation

Interpro

IPR033389--AUX/IAA_dom
IPR003311--AUX_IAA
IPR000270--PB1_dom

PROSITE

PS51745--PB1

Pfam

PF02309--AUX_IAA

Gene Ontology

GO:0005634--C:nucleus
GO:0009734--P:auxin-activated signaling pathway
GO:0006355--P:regulation of transcription, DNA-templated
GO:0006351--P:transcription, DNA-templated

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Bdi-014859	Brachypodium distachyon	61.30	1.00e-76	278.00
IUUC-Gma-043280	Glycine max	72.58	1.00e-87	315.00
IUUC-Hvu-047087	Hordeum vulgare	79.11	2.00e-69	253.00
IUUC-Mtr-058120	Medicago truncatula	72.08	6.00e-84	302.00
IUUC-Obr-076745	Oryza brachyantha	59.92	3.00e-72	263.00
IUUC-Pop-099516	Populus trichocarpa	82.76	5.00e-99	352.00
IUUC-Sbi-113862	Sorghum bicolor	55.51	1.00e-63	235.00
IUUC-Tae-123775	Triticum aestivum	77.30	6.00e-68	249.00

Created Date

25-Jun-2017

Functional Description

Protein Fasta Sequence

Nucleotide Fasta Sequence