iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Protein
Gene
Annotation
Classification
Domain Profile
Function
Protein Sequence
Nucleotide Sequence
Keyword
GO
Orthology
TOP

Tag

Content

iUUCD ID

IUUC-Atr-002435

Ensembl Protein ID

ERM93545

UniProt Accession

W1NEG4; W1NEG4_AMBTC

Genbank Protein ID

ERM93545.1

Protein Name

PHD finger protein ING

Genbank Nucleotide ID

KI397628

Gene Name

AMTR_s00004p00078450

Ensembl Information

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
AMTR_s00004p00078450	ERM93545	ERM93545

Status

Unreviewed

Classification

Family	E-Value	Score	Start	End
E3 activity/RING/PHD	3.30e-09	37.2	198	247

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Domain Profile

E3 activity/RING/PHD

   S: 2    kvClvCgeggedekslveCek..Cr..ewfHpaClklsveeelpnsekwiCpkCr 52
           ++C vC++ + ++  ++ C++  C+  ewfH+ C++l+ +e++ + + w+Cp Cr
   Q: 198  TYC-VCHQVSFGD--MIACDNenCEggEWFHYSCVGLT-SETRFKGK-WYCPTCR 247
           69*.********9..*****999*999***********.66666664.******8 PP

Organism

Amborella trichopoda

Protein Sequence
(Fasta)

MAIARTGVFV DDYLEYSSTL PAELQRLLST MRELDERSQA IINQTRDQTK YFLSMSGNGS 60
KKGNSEEDEG MEKLRKDIEM SQDNALSLCT EKVLLAQQAY DLIDSHVKRL DEDLTNFAED 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

ATGGCGATTG CTAGAACAGG AGTCTTCGTT GATGACTATC TCGAATGTAA ACCCTAACCC 60
TAATCTCTGA TAAAAACTAA CTTGCCGTTT CCATGGTGAA TAAAACCCTA ACCCTGAACC 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0156--Chromatin regulator
KW-0181--Complete proteome
KW-0479--Metal-binding
KW-0539--Nucleus
KW-1185--Reference proteome
KW-0862--Zinc
KW-0863--Zinc-finger

Interpro

IPR028652--ING2_plant-typ
IPR028651--ING_fam
IPR024610--ING_N_histone_binding
IPR011011--Znf_FYVE_PHD
IPR001965--Znf_PHD
IPR019787--Znf_PHD-finger
IPR013083--Znf_RING/FYVE/PHD

PROSITE

PS50016--ZF_PHD_2

Pfam

PF12998--ING
PF00628--PHD

SMART

SM01408--ING
SM00249--PHD

Gene Ontology

GO:0005634--C:nucleus
GO:0008270--F:zinc ion binding
GO:0016569--P:covalent chromatin modification

KEGG

atr:18421447

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Ath-006578	Arabidopsis thaliana	73.36	9.00e-97	345.00
IUUC-Acl-008091	Aspergillus clavatus	53.23	3.00e-18	85.90
IUUC-Ate-010297	Aspergillus terreus	54.10	3.00e-18	85.90
IUUC-Bdi-014508	Brachypodium distachyon	66.93	1.00e-96	344.00
IUUC-Bol-015751	Brassica oleracea	72.76	3.00e-102	363.00
IUUC-Bra-017962	Brassica rapa	72.69	2.00e-101	360.00
IUUC-Cel-018700	Caenorhabditis elegans	42.00	2.00e-05	43.50
IUUC-Dse-031323	Dothistroma septosporum	53.09	2.00e-18	86.30
IUUC-Fox-037925	Fusarium oxysporum	65.31	1.00e-16	80.10
IUUC-Gma-044224	Glycine max	70.99	4.00e-104	369.00
IUUC-Hvu-047275	Hordeum vulgare	67.45	2.00e-96	343.00
IUUC-Lpe-051512	Leersia perrieri	67.06	4.00e-97	346.00
IUUC-Lma-053234	Leptosphaeria maculans	53.33	9.00e-16	77.80
IUUC-Mtr-058288	Medicago truncatula	72.97	5.00e-105	372.00
IUUC-Mac-065671	Musa acuminata	75.70	4.00e-104	369.00
IUUC-Obr-076822	Oryza brachyantha	70.24	2.00e-99	353.00
IUUC-Ogl-077432	Oryza glaberrima	69.44	3.00e-99	353.00
IUUC-Osa-085802	Oryza sativa	69.44	3.00e-99	353.00
IUUC-Olu-087851	Ostreococcus lucimarinus	60.38	1.00e-16	78.60
IUUC-Ppa-096009	Physcomitrella patens	64.59	5.00e-89	319.00
IUUC-Pop-099544	Populus trichocarpa	72.35	9.00e-97	345.00
IUUC-Ppe-101698	Prunus persica	68.97	4.00e-92	329.00
IUUC-Smo-108678	Selaginella moellendorffii	64.78	1.00e-86	311.00
IUUC-Sit-110189	Setaria italica	69.72	1.00e-92	331.00
IUUC-Sly-111209	Solanum lycopersicum	76.77	2.00e-99	353.00
IUUC-Stu-112762	Solanum tuberosum	77.17	7.00e-100	355.00
IUUC-Sbi-114379	Sorghum bicolor	69.32	6.00e-98	348.00
IUUC-Tca-121271	Theobroma cacao	78.68	4.00e-99	352.00
IUUC-Tre-121950	Trichoderma reesei	57.38	1.00e-18	87.40
IUUC-Tae-122798	Triticum aestivum	67.84	8.00e-97	345.00
IUUC-Vvi-131583	Vitis vinifera	77.56	1.00e-111	394.00

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence