iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Protein
Gene
Annotation
Classification
Domain Profile
Function
Protein Sequence
Nucleotide Sequence
Keyword
GO
Orthology
TOP

Tag

Content

UUCD2 ID

IUUC-Sbi-114249

UUCD1 version

UUC-SoB-01469

Ensembl Protein ID

Sb10g004710.1

UniProt Accession

A0A194YHF2; A0A194YHF2_SORBI

Genbank Protein ID

KXG19399.1

Protein Name

Uncharacterized protein

Genbank Nucleotide ID

CM000769

Gene Name

SORBI_010G053900

Ensembl Information

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
Sb10g004710	Sb10g004710.1	Sb10g004710.1

Status

Unreviewed

Classification

Family	E-Value	Score	Start	End
E3 activity/RING/RING	9.90e-09	36.4	143	185

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Domain Profile

E3 activity/RING/RING

   S: 1    CaiCledf...kdgplvlp.CgHvfhadClqkwpglknssskefrCPlCr 46
           Ca+Cl++f   ++ +++lp CgH+fh dC+  w         + +CPlCr
   Q: 143  CAVCLCEFageDR-LRLLPlCGHAFHIDCIDTW------LLSNSTCPLCR 185
           ********99555.*******************......888889****8 PP

Organism

Sorghum bicolor

Protein Sequence
(Fasta)

MLLLLGLATG LAVAGEAEKQ QQDGGGGAAS SGGGGGHGSK ISPAVLFVVV IAAVVLFVSC 60
LLHLVVRLLL RRGRARARAE ADGGVDAAGG GGGGGEESAL QRQLQQLFHL HDAGLDQDVI 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

TCTTGGCCTT TCCCTCATCG CCTAATGCCT TGGCCTCTTG CACCTCCTGC AAGTTGCCGG 60
CAACCGAGAA GCTACCACTA GTAGCTGCTC AGGCAGGCTC CGCTCAGCTC AAAAAGGCGC 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0181--Complete proteome
KW-0472--Membrane
KW-1185--Reference proteome
KW-0812--Transmembrane
KW-1133--Transmembrane helix

Interpro

IPR001841--Znf_RING
IPR013083--Znf_RING/FYVE/PHD

PROSITE

PS50089--ZF_RING_2

Pfam

PF13639--zf-RING_2

SMART

SM00184--RING

Gene Ontology

GO:0016021--C:integral component of membrane
GO:0008270--F:zinc ion binding

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Bdi-014722	Brachypodium distachyon	62.73	6.00e-68	249.00
IUUC-Cme-027236	Cyanidioschyzon merolae	36.99	5.00e-09	53.50
IUUC-Hvu-047216	Hordeum vulgare	63.88	4.00e-58	216.00
IUUC-Lpe-051062	Leersia perrieri	69.50	2.00e-73	268.00
IUUC-Oba-075474	Oryza barthii	69.05	1.00e-74	272.00
IUUC-Obr-076722	Oryza brachyantha	68.78	1.00e-65	242.00
IUUC-Ogl-077349	Oryza glaberrima	69.70	5.00e-76	276.00
IUUC-Ogu-078645	Oryza glumaepatula	67.73	8.00e-75	273.00
IUUC-Oin-079758	Oryza indica	69.70	5.00e-76	276.00
IUUC-Oni-082295	Oryza nivara	69.70	5.00e-76	276.00
IUUC-Opu-083494	Oryza punctata	72.01	1.00e-72	266.00
IUUC-Oru-084903	Oryza rufipogon	69.70	5.00e-76	276.00
IUUC-Osa-085756	Oryza sativa	69.70	5.00e-76	276.00
IUUC-Sit-110257	Setaria italica	88.64	5.00e-98	350.00
IUUC-Tae-124145	Triticum aestivum	72.09	4.00e-83	300.00

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence