iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Protein
Gene
Annotation
Classification
Domain Profile
Function
Protein Sequence
Nucleotide Sequence
Keyword
GO
Orthology
TOP

Tag

Content

UUCD2 ID

IUUC-Sbi-113991

UUCD1 version

Ensembl Protein ID

UniProt Accession

Genbank Protein ID

Protein Name

Uncharacterized protein

Genbank Nucleotide ID

CM000761

Gene Name

SORBI_002G188200

Ensembl Information

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
Sb02g023600	Sb02g023600.1	Sb02g023600.1

Status

Unreviewed

Classification

Family	E-Value	Score	Start	End
E3 activity/RING/RING	9.40e-08	33.3	180	222

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Domain Profile

E3 activity/RING/RING

   S: 1    CaiCledf...kdgplvlp.CgHvfhadClqkwpglknssskefrCPlCr 46
           Ca+Cl++f   ++ +++lp CgH+fh  C+  w       + +++CPlCr
   Q: 180  CAVCLCEFadhDR-LRLLPlCGHAFHVACIDVW------LRSSATCPLCR 222
           ********77555.999****************......**********8 PP

Organism

Sorghum bicolor

Protein Sequence
(Fasta)

MAAGLRRAGG RFLLAREIRS SGAGANVHFF GARGGVTMPR ALLEDPAPAP AMDATATTTG 60
RGSPPSASVS AAASRITPAV LFVTVVLAVV LLVSGLLHVL RRVFLKSHHA SAGAGERQLQ 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

AAGCGAGGAC AGCAGCCCAA CCCCAACCCC GACCTGCCGA GCGCCGGCTG CCGCTGCGCA 60
CCACCACCAG CACAGGCACG AGACAGCGCT TCAGCTCACA TGCCGCGGCG GCCGGCACCG 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0181--Complete proteome
KW-0472--Membrane
KW-1185--Reference proteome
KW-0812--Transmembrane
KW-1133--Transmembrane helix

Interpro

IPR001841--Znf_RING
IPR013083--Znf_RING/FYVE/PHD

PROSITE

PS50089--ZF_RING_2

Pfam

PF13639--zf-RING_2

SMART

SM00184--RING

Gene Ontology

GO:0016021--C:integral component of membrane
GO:0061630--F:ubiquitin protein ligase activity
GO:0008270--F:zinc ion binding
GO:0043161--P:proteasome-mediated ubiquitin-dependent protein catabolic process

KEGG

sbi:SORBI_02g023600

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Bdi-014414	Brachypodium distachyon	56.01	1.00e-65	242.00
IUUC-Hvu-047539	Hordeum vulgare	51.90	2.00e-58	218.00
IUUC-Lpe-051134	Leersia perrieri	49.84	7.00e-50	190.00
IUUC-Ogu-078928	Oryza glumaepatula	53.77	2.00e-48	185.00
IUUC-Oni-082210	Oryza nivara	54.07	6.00e-53	200.00
IUUC-Opu-084033	Oryza punctata	52.78	8.00e-64	236.00
IUUC-Oru-084524	Oryza rufipogon	54.40	3.00e-52	197.00
IUUC-Osa-085361	Oryza sativa	54.40	7.00e-53	200.00
IUUC-Sit-110035	Setaria italica	67.31	3.00e-86	310.00
IUUC-Tae-124438	Triticum aestivum	50.12	2.00e-71	261.00

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence