iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Protein
Gene
Annotation
Classification
Domain Profile
Function
Protein Sequence
Nucleotide Sequence
Keyword
GO
Orthology
TOP

Tag

Content

UUCD2 ID

IUUC-Pma-094474

UUCD1 version

UUC-PeM-00328

Ensembl Protein ID

ENSPMAP00000005944.1

UniProt Accession

S4RL58; S4RL58_PETMA

Protein Name

Uncharacterized protein

Ensembl Information

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
ENSPMAG00000005402.1	ENSPMAT00000005972.1	ENSPMAP00000005944.1

Status

Unreviewed

Classification

Family	E-Value	Score	Start	End
E3 adaptor/Cullin RING/DCX/DWD	1.50e-12	46.5	155	191

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Domain Profile

E3 adaptor/Cullin RING/DCX/DWD

   S: 2    Htdsvtclaf...sdtllvsGsdDgtikvWDlrtgvl 35
           H+ +vt ++f    ++ll+s+s D t+k+WDlr  ++
   Q: 155  HKKKVTHVEFhpyCEWLLASASVDQTVKLWDLRAITD 191
           8899*******75449****************98766 PP

Organism

Petromyzon marinus

Protein Sequence
(Fasta)

SVARFGVMRK VSPFDRRVTC VAWHPSRPGT LAVASKGGDV LLWDHRALEP LSLLLGNGPG 60
DAVGGMRFDP RDTARVFVVS GDGSLLLRDV EGRAGPRGRI VANAPQCVHR HRDCGCWYCS 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

TCGGTGGCGC GCTTCGGCGT GATGCGGAAG GTCAGCCCGT TTGACCGGCG CGTCACCTGC 60
GTGGCGTGGC ACCCGTCGCG GCCCGGCACG CTCGCCGTGG CCTCCAAGGG CGGTGACGTC 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0853--WD repeat

Interpro

IPR033312--DDB2
IPR015943--WD40/YVTN_repeat-like_dom
IPR001680--WD40_repeat
IPR019775--WD40_repeat_CS
IPR017986--WD40_repeat_dom

PROSITE

PS00678--WD_REPEATS_1
PS50082--WD_REPEATS_2
PS50294--WD_REPEATS_REGION

Pfam

PF00400--WD40

SMART

SM00320--WD40

Gene Ontology

GO:0080008--C:Cul4-RING E3 ubiquitin ligase complex
GO:0005634--C:nucleus
GO:0003684--F:damaged DNA binding
GO:0006281--P:DNA repair

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Ata-000470	Aegilops tauschii	30.40	2.00e-35	141.00
IUUC-Aml-002203	Ailuropoda melanoleuca	47.77	6.00e-96	342.00
IUUC-Atr-002957	Amborella trichopoda	31.07	4.00e-36	144.00
IUUC-Apl-003832	Anas platyrhynchos	55.69	6.00e-115	405.00
IUUC-Aca-004358	Anolis carolinensis	53.35	5.00e-114	403.00
IUUC-Aly-006296	Arabidopsis lyrata	31.82	4.00e-37	147.00
IUUC-Ath-007115	Arabidopsis thaliana	31.82	5.00e-37	147.00
IUUC-Ame-010817	Astyanax mexicanus	51.20	2.00e-103	367.00
IUUC-Bta-012914	Bos taurus	49.12	1.00e-97	348.00
IUUC-Bdi-014261	Brachypodium distachyon	30.56	6.00e-34	137.00
IUUC-Bol-015317	Brassica oleracea	33.03	7.00e-39	153.00
IUUC-Bra-016848	Brassica rapa	32.73	4.00e-38	151.00
IUUC-Cja-018967	Callithrix jacchus	48.05	3.00e-96	343.00
IUUC-Cfa-021238	Canis familiaris	48.07	3.00e-90	323.00
IUUC-Cpo-022063	Cavia porcellus	49.85	5.00e-100	356.00
IUUC-Cre-022967	Chlamydomonas reinhardtii	22.56	2.00e-09	55.80
IUUC-Csa-023382	Chlorocebus sabaeus	47.15	3.00e-95	340.00
IUUC-Cho-024805	Choloepus hoffmanni	36.73	2.00e-37	147.00
IUUC-Cgl-026604	Colletotrichum gloeosporioides	25.00	1.00e-08	53.10
IUUC-Cme-027238	Cyanidioschyzon merolae	24.29	8.00e-04	37.40
IUUC-Dre-028732	Danio rerio	52.99	2.00e-106	377.00
IUUC-Dor-030461	Dipodomys ordii	54.95	1.00e-75	275.00
IUUC-Ete-033038	Echinops telfairi	46.65	1.00e-92	331.00
IUUC-Eca-033772	Equus caballus	48.53	2.00e-98	350.00
IUUC-Eeu-034662	Erinaceus europaeus	41.30	2.00e-19	88.60
IUUC-Fca-036095	Felis catus	48.36	1.00e-91	328.00
IUUC-Fso-038198	Fusarium solani	26.44	1.00e-11	62.80
IUUC-Gmo-039683	Gadus morhua	53.59	1.00e-106	377.00
IUUC-Gga-040530	Gallus gallus	55.98	1.00e-115	408.00
IUUC-Gac-041517	Gasterosteus aculeatus	52.33	4.00e-100	356.00
IUUC-Gma-043378	Glycine max	30.84	6.00e-38	150.00
IUUC-Ggo-045364	Gorilla gorilla	48.05	3.00e-96	343.00
IUUC-Hsa-046354	Homo sapiens	48.05	4.00e-96	343.00
IUUC-Hvu-047151	Hordeum vulgare	30.79	1.00e-29	122.00
IUUC-Itr-048304	Ictidomys tridecemlineatus	49.55	6.00e-99	352.00
IUUC-Lpe-051256	Leersia perrieri	30.86	2.00e-33	135.00
IUUC-Loc-052398	Lepisosteus oculatus	49.86	1.00e-102	365.00
IUUC-Laf-053562	Loxodonta africana	48.67	2.00e-97	347.00
IUUC-Mcc-055197	Macaca mulatta	48.57	4.00e-80	290.00
IUUC-Meu-056151	Macropus eugenii	48.95	2.00e-78	283.00
IUUC-Mtr-057940	Medicago truncatula	30.30	8.00e-37	146.00
IUUC-Mga-059923	Meleagris gallopavo	56.27	8.00e-123	432.00
IUUC-Mmr-061465	Microcebus murinus	49.12	2.00e-82	297.00
IUUC-Mdo-063063	Monodelphis domestica	48.96	2.00e-97	348.00
IUUC-Mmu-064294	Mus musculus	48.54	8.00e-98	348.00
IUUC-Mac-065598	Musa acuminata	30.64	2.00e-33	135.00
IUUC-Mpu-066831	Mustela putorius furo	48.07	6.00e-90	322.00
IUUC-Mlu-067222	Myotis lucifugus	47.06	1.00e-94	338.00
IUUC-Nle-069581	Nomascus leucogenys	47.75	2.00e-96	343.00
IUUC-Opr-070644	Ochotona princeps	49.25	1.00e-96	345.00
IUUC-Ont-072605	Oreochromis niloticus	53.73	1.00e-94	338.00
IUUC-Oan-072973	Ornithorhynchus anatinus	47.81	4.00e-96	342.00
IUUC-Ocu-074615	Oryctolagus cuniculus	48.66	6.00e-98	349.00
IUUC-Oba-075283	Oryza barthii	30.72	9.00e-34	136.00
IUUC-Obr-076605	Oryza brachyantha	31.85	3.00e-35	141.00
IUUC-Ogl-077512	Oryza glaberrima	30.72	1.00e-33	136.00
IUUC-Ogu-078329	Oryza glumaepatula	30.72	8.00e-34	136.00
IUUC-Oin-079980	Oryza indica	30.72	1.00e-33	136.00
IUUC-Olo-080516	Oryza longistaminata	30.42	2.00e-33	135.00
IUUC-Ome-081415	Oryza meridionalis	30.72	1.00e-33	135.00
IUUC-Oni-082985	Oryza nivara	30.72	1.00e-33	136.00
IUUC-Opu-084159	Oryza punctata	30.86	3.00e-34	138.00
IUUC-Oru-085137	Oryza rufipogon	30.72	6.00e-34	137.00
IUUC-Osa-085614	Oryza sativa	30.72	5.00e-34	137.00
IUUC-Ola-087044	Oryzias latipes	52.85	5.00e-105	373.00
IUUC-Olu-087680	Ostreococcus lucimarinus	27.32	1.00e-10	60.10
IUUC-Oga-088274	Otolemur garnettii	48.25	1.00e-98	351.00
IUUC-Oar-089826	Ovis aries	48.54	4.00e-97	346.00
IUUC-Ptr-091631	Pan troglodytes	48.05	4.00e-96	343.00
IUUC-Pan-092535	Papio anubis	47.45	3.00e-96	343.00
IUUC-Psi-093815	Pelodiscus sinensis	54.52	2.00e-110	390.00
IUUC-Ppa-095414	Physcomitrella patens	28.91	2.00e-29	122.00
IUUC-Pfo-096559	Poecilia formosa	53.75	5.00e-102	363.00
IUUC-Pab-098528	Pongo abelii	48.05	3.00e-96	343.00
IUUC-Pop-100064	Populus trichocarpa	31.50	4.00e-36	144.00
IUUC-Pca-100803	Procavia capensis	48.68	2.00e-96	344.00
IUUC-Ppe-101966	Prunus persica	31.82	1.00e-36	146.00
IUUC-Pva-103213	Pteropus vampyrus	47.35	3.00e-96	343.00
IUUC-Ptt-103899	Puccinia triticina	23.53	6.00e-06	44.30
IUUC-Rno-105087	Rattus norvegicus	48.66	1.00e-96	345.00
IUUC-Sha-107466	Sarcophilus harrisii	48.69	2.00e-98	351.00
IUUC-Smo-108958	Selaginella moellendorffii	29.76	3.00e-32	131.00
IUUC-Sit-109968	Setaria italica	31.33	8.00e-34	136.00
IUUC-Sly-111495	Solanum lycopersicum	29.94	7.00e-36	143.00
IUUC-Sar-113272	Sorex araneus	45.91	7.00e-93	332.00
IUUC-Sbi-114706	Sorghum bicolor	30.15	1.00e-31	129.00
IUUC-Ssc-115615	Sus scrofa	47.95	6.00e-94	336.00
IUUC-Tgu-116602	Taeniopygia guttata	53.51	5.00e-111	392.00
IUUC-Tru-118698	Takifugu rubripes	51.20	4.00e-92	330.00
IUUC-Tsy-119027	Tarsius syrichta	48.14	7.00e-83	299.00
IUUC-Tni-119787	Tetraodon nigroviridis	53.75	1.00e-104	371.00
IUUC-Tca-121447	Theobroma cacao	31.61	2.00e-36	145.00
IUUC-Tae-124613	Triticum aestivum	30.40	3.00e-35	141.00
IUUC-Tur-126724	Triticum urartu	30.56	1.00e-34	139.00
IUUC-Tbe-127680	Tupaia belangeri	45.61	3.00e-71	260.00
IUUC-Ttr-128201	Tursiops truncatus	38.87	2.00e-68	251.00
IUUC-Vda-129981	Verticillium dahliae	25.89	5.00e-09	54.70
IUUC-Vpa-130451	Vicugna pacos	56.34	3.00e-22	97.80
IUUC-Vvi-131001	Vitis vinifera	31.21	6.00e-37	147.00
IUUC-Xtr-132266	Xenopus tropicalis	54.24	4.00e-108	383.00
IUUC-Xma-133034	Xiphophorus maculatus	54.04	3.00e-96	343.00

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence