iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Protein
Gene
Annotation
Classification
Domain Profile
Function
Protein Sequence
Nucleotide Sequence
Keyword
GO
Orthology
TOP

Tag

Content

iUUCD ID

IUUC-Tur-126061

Ensembl Protein ID

TRIUR3_09939-P1

UniProt Accession

M7ZLV2; M7ZLV2_TRIUA

Genbank Protein ID

EMS53340.1

Protein Name

RING-H2 finger protein ATL60

Genbank Nucleotide ID

KD195639

Gene Name

TRIUR3_09939

Ensembl Information

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
TRIUR3_09939	TRIUR3_09939-T1	TRIUR3_09939-P1

Status

Unreviewed

Classification

Family	E-Value	Score	Start	End
E3 activity/RING/RING	4.90e-06	27.7	89	131

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Domain Profile

E3 activity/RING/RING

   S: 1    CaiCledf....kdgplvlp.CgHvfhadClqkwpglknssskefrCPlCr 46
           Ca+Cl  +    +   ++lp C Hv+h +C+  w         + +CPlCr
   Q: 89   CAVCLGTIrvgaM--AKLLPaCAHVYHVECIDLW------LAAHSTCPLCR 131
           ******9944321..567889*************......**********8 PP

Organism

Triticum urartu

Protein Sequence
(Fasta)

MRFAMSPDSL LLFYAAAAAV TAAFGLFSLY KHLVRQRRHH PSADAPDGDM EERRPLAVTT 60
VASSILPPFM YNRLVRHSGK GDDAGSTECA VCLGTIRVGA MAKLLPACAH VYHVECIDLW 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

ATGCGTTTCG CCATGTCGCC CGACAGCCTC CTCCTCTTCT ACGCCGCCGC GGCGGCCGTC 60
ACCGCCGCCT TCGGCCTCTT CTCGCTGTAC AAGCACCTCG TGCGCCAACG GCGGCACCAC 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0181--Complete proteome
KW-0472--Membrane
KW-1185--Reference proteome
KW-0812--Transmembrane
KW-1133--Transmembrane helix

Interpro

IPR001841--Znf_RING
IPR013083--Znf_RING/FYVE/PHD

PROSITE

PS50089--ZF_RING_2

Pfam

PF13639--zf-RING_2

SMART

SM00184--RING

Gene Ontology

GO:0016021--C:integral component of membrane
GO:0008270--F:zinc ion binding

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Ata-000814	Aegilops tauschii	88.28	2.00e-65	239.00
IUUC-Hvu-047214	Hordeum vulgare	86.58	9.00e-67	244.00
IUUC-Oba-075497	Oryza barthii	59.48	8.00e-38	150.00
IUUC-Obr-076698	Oryza brachyantha	59.73	2.00e-34	137.00
IUUC-Ogl-077042	Oryza glaberrima	58.82	1.00e-38	151.00
IUUC-Ogu-078630	Oryza glumaepatula	57.14	3.00e-36	143.00
IUUC-Oin-079284	Oryza indica	58.82	6.00e-34	135.00
IUUC-Ome-081284	Oryza meridionalis	56.21	1.00e-36	144.00
IUUC-Oni-082713	Oryza nivara	61.67	9.00e-17	79.00
IUUC-Opu-083390	Oryza punctata	57.72	3.00e-37	146.00
IUUC-Oru-084930	Oryza rufipogon	60.13	3.00e-34	139.00
IUUC-Osa-085428	Oryza sativa	60.13	3.00e-35	139.00
IUUC-Sit-109739	Setaria italica	52.32	5.00e-32	129.00
IUUC-Sbi-113968	Sorghum bicolor	74.29	1.00e-26	111.00
IUUC-Tae-123801	Triticum aestivum	99.33	5.00e-78	283.00

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence