iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Protein
Gene
Annotation
Classification
Domain Profile
Function
Protein Sequence
Nucleotide Sequence
Keyword
GO
Orthology
TOP

Tag

Content

iUUCD ID

IUUC-Sly-111292

Ensembl Protein ID

Solyc03g112340.1.1

UniProt Accession

K4BK88; K4BK88_SOLLC

Protein Name

Uncharacterized protein

Ensembl Information

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
Solyc03g112340.1	Solyc03g112340.1.1	Solyc03g112340.1.1

Status

Unreviewed

Classification

Family	E-Value	Score	Start	End
E3 activity/RING/RING	7.90e-08	33.5	119	161

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Domain Profile

E3 activity/RING/RING

   S: 1    CaiCledfkdg..plvlp.CgHvfhadClqkwpglknssskefrCPlCr 46
           Ca+Cl++f+d   +++ p C Hvfh +C+ +w       + + +CP+Cr
   Q: 119  CAVCLNEFEDDemLRLIPkCDHVFHPECIDAW------LKSHVTCPVCR 161
           ********55445777889*************......**********8 PP

Organism

Solanum lycopersicum

Protein Sequence
(Fasta)

MVNFKALSVN LLLLVLLCPA SAQPSNSPDS ENRFEYPSVS PAMAIIIVIL IAALFFIAFF 60
SIYIRNRGAV NGSIGQTFSM RRRTAAATRG LEDSVIETFP TFTYVEVKDH HIGKGALECA 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

ATGGTTAATT TTAAAGCTCT TTCCGTTAAT CTCCTCCTAT TAGTATTACT ATGTCCGGCG 60
TCAGCTCAGC CATCAAATTC CCCTGATTCC GAGAATCGGT TCGAGTACCC GAGTGTCAGT 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0181--Complete proteome
KW-0472--Membrane
KW-1185--Reference proteome
KW-0732--Signal
KW-0812--Transmembrane
KW-1133--Transmembrane helix

Interpro

IPR001841--Znf_RING
IPR013083--Znf_RING/FYVE/PHD

PROSITE

PS50089--ZF_RING_2

Pfam

PF13639--zf-RING_2

SMART

SM00184--RING

Gene Ontology

GO:0016021--C:integral component of membrane
GO:0061630--F:ubiquitin protein ligase activity
GO:0008270--F:zinc ion binding
GO:0043161--P:proteasome-mediated ubiquitin-dependent protein catabolic process

KEGG

sly:101265719

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Ata-000107	Aegilops tauschii	35.21	5.00e-32	130.00
IUUC-Aly-006030	Arabidopsis lyrata	41.67	2.00e-55	208.00
IUUC-Ath-006979	Arabidopsis thaliana	40.67	3.00e-54	204.00
IUUC-Bol-016195	Brassica oleracea	44.38	2.00e-56	211.00
IUUC-Bra-017552	Brassica rapa	49.81	3.00e-52	197.00
IUUC-Cme-027122	Cyanidioschyzon merolae	37.93	4.00e-13	69.30
IUUC-Gma-043536	Glycine max	48.35	9.00e-56	209.00
IUUC-Hvu-047493	Hordeum vulgare	39.69	1.00e-38	152.00
IUUC-Mtr-058791	Medicago truncatula	48.62	1.00e-58	219.00
IUUC-Mvi-060211	Microbotryum violaceum	53.33	1.00e-10	62.00
IUUC-Mac-064577	Musa acuminata	36.88	1.00e-46	179.00
IUUC-Obr-076839	Oryza brachyantha	40.29	6.00e-46	177.00
IUUC-Ogu-078376	Oryza glumaepatula	43.90	2.00e-37	149.00
IUUC-Opu-083745	Oryza punctata	37.80	1.00e-34	139.00
IUUC-Pop-099263	Populus trichocarpa	51.06	4.00e-71	260.00
IUUC-Ppe-101166	Prunus persica	46.26	2.00e-70	258.00
IUUC-Stu-112111	Solanum tuberosum	94.97	0.00e+00	675.00
IUUC-Tca-120966	Theobroma cacao	54.23	8.00e-80	289.00
IUUC-Uma-129479	Ustilago maydis	38.03	2.00e-10	60.50

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence