iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Protein
Gene
Annotation
Classification
Domain Profile
Function
Protein Sequence
Nucleotide Sequence
Keyword
GO
Orthology
TOP

Tag

Content

UUCD2 ID

IUUC-Vvi-131367

UUCD1 version

UUC-ViV-00726

Ensembl Protein ID

VIT_00s0471g00010.t01

UniProt Accession

F6HJQ8; F6HJQ8_VITVI

Genbank Protein ID

CCB53346.1

Protein Name

RING-type E3 ubiquitin transferase

Genbank Nucleotide ID

FN595797

Gene Name

VIT_00s0471g00010

Ensembl Information

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
VIT_00s0471g00010	VIT_00s0471g00010.t01	VIT_00s0471g00010.t01

Status

Unreviewed

Classification

Family	E-Value	Score	Start	End
E3 activity/RING/U-box	3.40e-28	98.1	63	134

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Domain Profile

E3 activity/RING/U-box

   S: 1    evpeeflCpIslelMrdPvvlpsGitydrssIekwlasggktcPvtrqplteedlvPnltlrrliqawceen 72
           e+p+ f+CpIsle+M+dPv+l++G+ty+rs+I kw++ g+ tcP+t+q+l +++++Pn+tl +li +w +++
   Q: 63   EIPSVFICPISLEPMQDPVTLCTGQTYERSNILKWFSLGHLTCPTTMQELWDDSVTPNKTLYHLIYSWFSQK 134
           69******************************************************************9986 PP

Organism

Vitis vinifera

Protein Sequence
(Fasta)

MPMFQHYQKD GLVGFDGGGD GHVLDLDTAV KDGVLGGGGG GVVGGIAEKL DLKRMIEELD 60
LSEIPSVFIC PISLEPMQDP VTLCTGQTYE RSNILKWFSL GHLTCPTTMQ ELWDDSVTPN 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

GCCTTTGTAG GGCATGTCCT CTCTGTCTTC TCTCTCCTCT CTGTGTGGTG GTATGGCCTT 60
CAACTTCCCT TGAGTACTCA GACTTATCTC AGGTTCTAAT GATCTGGGTT CATTATTGTT 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0181--Complete proteome
KW-1185--Reference proteome
KW-0808--Transferase

Interpro

IPR011989--ARM-like
IPR016024--ARM-type_fold
IPR003613--Ubox_domain
IPR013083--Znf_RING/FYVE/PHD

PROSITE

PS51698--U_BOX

Pfam

PF04564--U-box

SMART

SM00504--Ubox

Gene Ontology

GO:0004842--F:ubiquitin-protein transferase activity

KEGG

vvi:100252523

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Ata-000254	Aegilops tauschii	58.13	4.00e-144	503.00
IUUC-Atr-002608	Amborella trichopoda	70.22	7.00e-166	575.00
IUUC-Aly-005542	Arabidopsis lyrata	74.55	4.00e-175	606.00
IUUC-Ath-007399	Arabidopsis thaliana	75.45	1.00e-177	614.00
IUUC-Bdi-014966	Brachypodium distachyon	59.47	2.00e-149	521.00
IUUC-Bol-015410	Brassica oleracea	74.55	5.00e-173	599.00
IUUC-Bra-017594	Brassica rapa	75.38	6.00e-168	582.00
IUUC-Gma-043270	Glycine max	79.96	0.00e+00	715.00
IUUC-Hvu-047172	Hordeum vulgare	59.33	2.00e-143	501.00
IUUC-Lpe-050937	Leersia perrieri	59.16	2.00e-132	464.00
IUUC-Mtr-058060	Medicago truncatula	79.60	0.00e+00	711.00
IUUC-Oba-075363	Oryza barthii	55.01	3.00e-106	377.00
IUUC-Obr-076221	Oryza brachyantha	59.02	4.00e-140	490.00
IUUC-Ogl-077601	Oryza glaberrima	60.13	3.00e-127	447.00
IUUC-Ogu-078802	Oryza glumaepatula	59.91	4.00e-136	477.00
IUUC-Oin-079670	Oryza indica	59.91	9.00e-127	446.00
IUUC-Olo-080252	Oryza longistaminata	64.10	3.00e-84	304.00
IUUC-Ome-081565	Oryza meridionalis	59.91	9.00e-127	446.00
IUUC-Oni-082638	Oryza nivara	59.91	9.00e-127	446.00
IUUC-Opu-083387	Oryza punctata	59.69	3.00e-127	447.00
IUUC-Oru-084585	Oryza rufipogon	59.91	9.00e-127	446.00
IUUC-Osa-086056	Oryza sativa	59.91	9.00e-127	446.00
IUUC-Ppe-101617	Prunus persica	84.41	0.00e+00	699.00
IUUC-Ptt-103906	Puccinia triticina	28.36	5.50e-01	26.90
IUUC-Sit-109761	Setaria italica	60.36	5.00e-141	493.00
IUUC-Sbi-113971	Sorghum bicolor	61.02	2.00e-147	514.00
IUUC-Tca-121202	Theobroma cacao	84.48	0.00e+00	753.00
IUUC-Tae-123424	Triticum aestivum	58.13	4.00e-144	503.00
IUUC-Tur-126157	Triticum urartu	64.13	5.00e-63	233.00

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence