iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Protein
Gene
Annotation
Classification
Domain Profile
Function
Protein Sequence
Nucleotide Sequence
Keyword
GO
Orthology
TOP

Tag

Content

iUUCD ID

IUUC-Sit-109991

Ensembl Protein ID

Si012240m

UniProt Accession

K3YDD5; K3YDD5_SETIT

Genbank Protein ID

KQK96860.1

Protein Name

RING-type E3 ubiquitin transferase

Genbank Nucleotide ID

CM003534

Gene Name

LOC101779410; SETIT_012240mg

Ensembl Information

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
Si012240m.g	Si012240m	Si012240m

Status

Unreviewed

Classification

Family	E-Value	Score	Start	End
E3 activity/RING/U-box	2.10e-23	83.1	287	359

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Domain Profile

E3 activity/RING/U-box

   S: 2    vpeeflCpIslelMrdPvvlpsGitydrssIekwlasggktcPvtrqplteedlvPnltlrrliqawceenss 74
           vp++f+Cp+s ++M++Pvv++sG t+drs++e+w ++ ++ cPvt++ l++++++Pn+ ++  i++w+++n++
   Q: 287  VPHFFVCPVSDKVMENPVVIASGKTVDRSALEEWRKEHQRICPVTGEVLSHTMFIPNILIKLCIERWRAANKI 359
           89*******************************************************************9986 PP

Organism

Setaria italica

Protein Sequence
(Fasta)

MDWSEEGFNE EEQPSLRRRT ARRRSPPGPG SRASESRSPS PRRGGLAPAG SRSPSPRRTG 60
IMATRLGSSV RTTRRSPPPR TPGADAPAGG AGGGGEDTGV EEVIAKMREG LLPAPAAARD 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

ATGGACTGGT CGGAGGAGGG GTTCAACGAG GAGGAGCAGC CGTCGCTGCG CAGGCGCACC 60
GCGAGGCGGC GTTCTCCGCC CGGGCCGGGC TCTCGGGCCT CCGAGTCGAG GTCGCCCTCT 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0181--Complete proteome
KW-1185--Reference proteome
KW-0808--Transferase

Interpro

IPR011989--ARM-like
IPR016024--ARM-type_fold
IPR000225--Armadillo
IPR003613--Ubox_domain
IPR013083--Znf_RING/FYVE/PHD

PROSITE

PS51698--U_BOX

Pfam

PF00514--Arm
PF04564--U-box

SMART

SM00504--Ubox

Gene Ontology

GO:0004842--F:ubiquitin-protein transferase activity

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Ata-001015	Aegilops tauschii	50.23	7.00e-107	380.00
IUUC-Bdi-014181	Brachypodium distachyon	58.50	1.00e-156	546.00
IUUC-Hvu-047192	Hordeum vulgare	55.56	1.00e-146	512.00
IUUC-Lpe-051723	Leersia perrieri	52.23	2.00e-130	458.00
IUUC-Oba-075695	Oryza barthii	53.39	1.00e-134	473.00
IUUC-Obr-076271	Oryza brachyantha	54.71	3.00e-130	457.00
IUUC-Ogl-077902	Oryza glaberrima	53.03	8.00e-138	483.00
IUUC-Ogu-078226	Oryza glumaepatula	53.58	4.00e-135	474.00
IUUC-Oin-079808	Oryza indica	55.84	2.00e-122	432.00
IUUC-Olo-080703	Oryza longistaminata	53.08	5.00e-100	357.00
IUUC-Ome-081157	Oryza meridionalis	53.21	7.00e-138	483.00
IUUC-Oni-082070	Oryza nivara	53.39	4.00e-134	471.00
IUUC-Opu-083808	Oryza punctata	56.60	1.00e-139	489.00
IUUC-Oru-085024	Oryza rufipogon	53.39	4.00e-134	471.00
IUUC-Sbi-114496	Sorghum bicolor	65.17	0.00e+00	728.00
IUUC-Tae-124210	Triticum aestivum	55.80	5.00e-162	563.00
IUUC-Tur-126074	Triticum urartu	54.01	7.00e-148	516.00

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence