iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Protein
Gene
Annotation
Classification
Domain Profile
Function
Protein Sequence
Nucleotide Sequence
Keyword
GO
Orthology
TOP

Tag

Content

UUCD2 ID

IUUC-Sbi-113868

UUCD1 version

UUC-SoB-00895

Ensembl Protein ID

Sb05g003050.1

UniProt Accession

A0A1B6PQ06; A0A1B6PQ06_SORBI

Genbank Protein ID

KXG27738.1

Protein Name

Uncharacterized protein

Genbank Nucleotide ID

CM000764

Gene Name

SORBI_005G036400

Ensembl Information

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
Sb05g003050	Sb05g003050.1	Sb05g003050.1

Status

Unreviewed

Classification

Family	E-Value	Score	Start	End
E3 activity/RING/RING	5.20e-08	34.1	94	136

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Domain Profile

E3 activity/RING/RING

   S: 1    CaiCledfkdg..plvlp.CgHvfhadClqkwpglknssskefrCPlCr 46
           C iCl ++++g  ++vlp CgH fh  C+  w        ++ +CP+Cr
   Q: 94   CVICLAEYEEGdvLRVLPhCGHDFHMACIDLW------LEQNSTCPVCR 136
           ********7776688999**************......**********8 PP

Organism

Sorghum bicolor

Protein Sequence
(Fasta)

MALALAGFCF SLIFIAFVCS RLACALLRRH RRRARSRLAA VLPRYAADYT FTVVQVHHPA 60
ADAAAGGLGP AAVAALPTRA FAARPGGSDA DSQCVICLAE YEEGDVLRVL PHCGHDFHMA 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

ATGGCGCTGG CGCTGGCGGG GTTCTGCTTC AGCCTAATCT TCATCGCCTT CGTCTGCTCC 60
CGCCTGGCCT GCGCGCTCCT CCGCCGCCAC CGCCGCCGCG CCCGCTCACG CCTCGCCGCC 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0181--Complete proteome
KW-0472--Membrane
KW-1185--Reference proteome
KW-0812--Transmembrane
KW-1133--Transmembrane helix

Interpro

IPR001841--Znf_RING
IPR013083--Znf_RING/FYVE/PHD

PROSITE

PS50089--ZF_RING_2

Pfam

PF13639--zf-RING_2

SMART

SM00184--RING

Gene Ontology

GO:0016021--C:integral component of membrane
GO:0008270--F:zinc ion binding

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Ata-001181	Aegilops tauschii	50.00	7.00e-19	87.00
IUUC-Bdi-014707	Brachypodium distachyon	51.25	5.00e-36	143.00
IUUC-Cel-018318	Caenorhabditis elegans	46.67	9.00e-12	64.30
IUUC-Hvu-047710	Hordeum vulgare	54.42	1.00e-28	119.00
IUUC-Lpe-050686	Leersia perrieri	49.79	6.00e-36	142.00
IUUC-Loc-052124	Lepisosteus oculatus	50.77	4.00e-14	72.40
IUUC-Oba-075916	Oryza barthii	49.79	1.00e-36	145.00
IUUC-Obr-076903	Oryza brachyantha	54.97	4.00e-33	133.00
IUUC-Ogl-077876	Oryza glaberrima	49.59	1.00e-36	145.00
IUUC-Ogu-078366	Oryza glumaepatula	65.71	7.00e-30	123.00
IUUC-Oin-079227	Oryza indica	56.43	2.00e-33	135.00
IUUC-Ome-081999	Oryza meridionalis	49.59	2.00e-37	148.00
IUUC-Oni-083053	Oryza nivara	65.71	1.00e-29	122.00
IUUC-Opu-083989	Oryza punctata	50.82	2.00e-38	151.00
IUUC-Oru-084285	Oryza rufipogon	65.71	1.00e-29	122.00
IUUC-Osa-086218	Oryza sativa	49.38	5.00e-36	143.00
IUUC-Sit-110660	Setaria italica	62.85	8.00e-52	196.00
IUUC-Tae-125846	Triticum aestivum	58.12	2.00e-30	125.00
IUUC-Tur-126123	Triticum urartu	55.63	4.00e-29	119.00

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence