iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Protein
Gene
Annotation
Classification
Domain Profile
Function
Protein Sequence
Nucleotide Sequence
Keyword
GO
Orthology
TOP

Tag

Content

UUCD2 ID

IUUC-Sbi-113817

UUCD1 version

Ensembl Protein ID

UniProt Accession

Genbank Protein ID

Protein Name

Uncharacterized protein

Genbank Nucleotide ID

CM000760

Gene Name

SORBI_001G345400

Ensembl Information

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
Sb01g033150	Sb01g033150.1	Sb01g033150.1

Status

Unreviewed

Classification

Family	E-Value	Score	Start	End
E3 activity/RING/RING	1.70e-07	32.4	96	138

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Domain Profile

E3 activity/RING/RING

   S: 1    CaiCledf...kdgplvlp.CgHvfhadClqkwpglknssskefrCPlCr 46
           Ca+C  +    +   +vlp CgH+fh +C+ +w       + + +CPlCr
   Q: 96   CAVCIAEVgpgE-AARVLPrCGHAFHVECVDMW------LRSHSTCPLCR 138
           9***99887743.3788888*************......**********8 PP

Organism

Sorghum bicolor

Protein Sequence
(Fasta)

MAVTGTSVAA AATMLAAAAA IFITFVICFY LFLCAKRYRG AAPTIGGGGG ERQDLGRPRF 60
VFAGAGCHGG GGGMGEAAIA ALPRKEVGAG DTPADCAVCI AEVGPGEAAR VLPRCGHAFH 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

ATGGCGGTGA CGGGCACCTC CGTGGCCGCG GCGGCCACGA TGCTGGCGGC GGCGGCGGCC 60
ATCTTCATCA CCTTCGTCAT CTGCTTCTAC CTCTTCCTCT GCGCCAAGCG GTACCGCGGC 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0181--Complete proteome
KW-0472--Membrane
KW-1185--Reference proteome
KW-0812--Transmembrane
KW-1133--Transmembrane helix

Interpro

IPR001841--Znf_RING
IPR013083--Znf_RING/FYVE/PHD

PROSITE

PS50089--ZF_RING_2

Pfam

PF13639--zf-RING_2

SMART

SM00184--RING

Gene Ontology

GO:0016021--C:integral component of membrane
GO:0061630--F:ubiquitin protein ligase activity
GO:0008270--F:zinc ion binding
GO:0043161--P:proteasome-mediated ubiquitin-dependent protein catabolic process

KEGG

sbi:SORBI_01g033150

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Hvu-047221	Hordeum vulgare	76.04	1.00e-37	147.00
IUUC-Ogl-077220	Oryza glaberrima	76.25	4.00e-24	104.00
IUUC-Ogu-078517	Oryza glumaepatula	76.25	4.00e-24	104.00
IUUC-Oin-079120	Oryza indica	77.50	4.00e-26	110.00
IUUC-Oni-082924	Oryza nivara	77.50	4.00e-26	110.00
IUUC-Oru-084525	Oryza rufipogon	77.50	5.00e-26	110.00
IUUC-Osa-085689	Oryza sativa	77.50	5.00e-26	110.00
IUUC-Sit-110093	Setaria italica	86.14	2.00e-34	137.00

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence