iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
fgenesh2_kg.8__1243__AT5G53500.1	fgenesh2_kg.8__1243__AT5G53500.1	fgenesh2_kg.8__1243__AT5G53500.1

Status

Unreviewed

Classification

Family	E-Value	Score	Start	End
E3 adaptor/Cullin RING/DCX/DWD	8.40e-27	92.8	326	362

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Domain Profile

E3 adaptor/Cullin RING/DCX/DWD

   S: 1    gHtdsvtclaf.sdtllvsGsdDgtikvWDlrtgvll 36
           gHt++v ++++  d++l+s+s D+t+++W + ++ +l
   Q: 326  GHTGEVLDISWsKDNYLLSASMDKTVRLWKVGSDACL 362
           8**********877****************9888776 PP

Organism

Arabidopsis lyrata

Protein Sequence
(Fasta)

MDYLSQEEDL QFFDANEEMM ALNPSGFGFD VWNDSPGSVV ERRRKFLEWM GVEEEDRVEA 60
KDSVSVSSVE SGFDGAEEIS IEAEERSGGF SSSSSQVSLS GSSVEVSEEL CLRVDRNVGG 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

TCTATTCCCT CCGGACAATC CCATCTTCTT CTTCTTCCCC CTTATTGTCT CTTTCTTCAC 60
AGACTTCAAT AAAAAAAAAA ACCTTTGTTT TTTCTCTTCT CTTCTCTTCT CTTCTTTTAA 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0181--Complete proteome
KW-1185--Reference proteome
KW-0853--WD repeat

Interpro

IPR020472--G-protein_beta_WD-40_rep
IPR015943--WD40/YVTN_repeat-like_dom
IPR001680--WD40_repeat
IPR017986--WD40_repeat_dom

PROSITE

PS50082--WD_REPEATS_2
PS50294--WD_REPEATS_REGION

Pfam

PF00400--WD40

PRINTS

PR00320--GPROTEINBRPT

SMART

SM00320--WD40

KEGG

aly:ARALYDRAFT_495427

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Ata-000337	Aegilops tauschii	47.82	4.00e-128	451.00
IUUC-Atr-002755	Amborella trichopoda	52.14	6.00e-140	490.00
IUUC-Ath-006851	Arabidopsis thaliana	94.34	0.00e+00	1165.00
IUUC-Bdi-014709	Brachypodium distachyon	46.62	1.00e-135	476.00
IUUC-Bol-016589	Brassica oleracea	76.46	0.00e+00	981.00
IUUC-Bra-016941	Brassica rapa	77.51	0.00e+00	994.00
IUUC-Hvu-047828	Hordeum vulgare	46.03	1.00e-131	462.00
IUUC-Mtr-057948	Medicago truncatula	54.62	7.00e-156	543.00
IUUC-Oba-075132	Oryza barthii	44.97	5.00e-126	444.00
IUUC-Obr-076155	Oryza brachyantha	44.61	1.00e-133	469.00
IUUC-Ogu-078784	Oryza glumaepatula	44.97	6.00e-126	444.00
IUUC-Opu-083689	Oryza punctata	45.05	3.00e-124	438.00
IUUC-Oru-085238	Oryza rufipogon	45.16	2.00e-126	445.00
IUUC-Sbi-114446	Sorghum bicolor	47.20	2.00e-131	462.00
IUUC-Tae-125183	Triticum aestivum	48.56	1.00e-130	459.00
IUUC-Tur-126854	Triticum urartu	48.11	2.00e-129	455.00
IUUC-Vvi-131295	Vitis vinifera	57.30	2.00e-162	565.00

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence