iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Protein
Gene
Annotation
Classification
Domain Profile
Function
Protein Sequence
Nucleotide Sequence
Keyword
GO
Orthology
TOP

Tag

Content

iUUCD ID

IUUC-Tca-121104

Ensembl Protein ID

EOY31365

UniProt Accession

A0A061GNC5; A0A061GNC5_THECC

Genbank Protein ID

EOY31365.1

Protein Name

RING/U-box superfamily protein

Genbank Nucleotide ID

CM001887

Gene Name

TCM_038306

Ensembl Information

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
TCM_038306	EOY31365	EOY31365

Status

Unreviewed

Classification

Family	E-Value	Score	Start	End
E3 activity/RING/RING	3.40e-07	31.6	360	401

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Domain Profile

E3 activity/RING/RING

   S: 1    CaiCledf..kdgplvlpCgHvfhadClqkwpglknssskefrCPlCr 46
           C+iCl  +   d+++ lpC H++h++C+ kw       + +++CPlC+
   Q: 360  CCICLAKYanNDELRELPCSHFMHKECVDKW------LKINASCPLCK 401
           ********98666******************......**********7 PP

Organism

Theobroma cacao

Protein Sequence
(Fasta)

MDVPSAELHS EHRTDTCPLL MERSENFSEH IIDIPRSGET SSSNLSHDRT SNGLDVLQHE 60
DRPSGSARVL GSQPSSFSSN GTNSRTSSAV RRGDARRRRS PLNSGLWISI ELVLTVSQIV 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

AACAAGTAAA AGGAGGAATG GGCGAATGGG AGGAAGGACC AGATTTGAAA CTTGTGGGTG 60
CGTCGCTTTT TCCAACGGCG ACCCGTTGCA GCTAGTGATC CTCTAAAGGC ACAGACAAGC 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0181--Complete proteome
KW-0472--Membrane
KW-0479--Metal-binding
KW-1185--Reference proteome
KW-0812--Transmembrane
KW-1133--Transmembrane helix
KW-0862--Zinc
KW-0863--Zinc-finger

Interpro

IPR001841--Znf_RING
IPR011016--Znf_RING-CH
IPR013083--Znf_RING/FYVE/PHD

PROSITE

PS50089--ZF_RING_2

Pfam

PF13639--zf-RING_2

SMART

SM00184--RING
SM00744--RINGv

Gene Ontology

GO:0016021--C:integral component of membrane
GO:0008270--F:zinc ion binding

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Aly-005824	Arabidopsis lyrata	66.00	4.00e-139	487.00
IUUC-Ath-007421	Arabidopsis thaliana	64.99	5.00e-138	483.00
IUUC-Bol-015448	Brassica oleracea	63.97	2.00e-138	484.00
IUUC-Bra-017950	Brassica rapa	63.51	3.00e-134	471.00
IUUC-Mtr-058402	Medicago truncatula	63.70	3.00e-117	414.00
IUUC-Ome-081533	Oryza meridionalis	51.45	3.00e-88	318.00
IUUC-Oru-084956	Oryza rufipogon	51.22	1.00e-89	322.00
IUUC-Osa-085907	Oryza sativa	51.45	8.00e-90	323.00
IUUC-Ppa-095745	Physcomitrella patens	56.23	1.00e-85	309.00
IUUC-Pop-099755	Populus trichocarpa	78.48	9.00e-171	592.00
IUUC-Ppe-102005	Prunus persica	72.28	6.00e-166	576.00
IUUC-Sit-109918	Setaria italica	58.63	6.00e-117	413.00
IUUC-Sly-111768	Solanum lycopersicum	65.93	4.00e-123	433.00
IUUC-Stu-112684	Solanum tuberosum	67.78	1.00e-119	422.00
IUUC-Tae-123033	Triticum aestivum	52.50	5.00e-88	317.00
IUUC-Tur-126522	Triticum urartu	55.14	4.00e-87	314.00

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence