iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Protein
Gene
Annotation
Classification
Domain Profile
Function
Protein Sequence
Nucleotide Sequence
Keyword
GO
Orthology
TOP

Tag

Content

iUUCD ID

IUUC-Mtr-058050

Ensembl Protein ID

KEH39839

UniProt Accession

A0A072VCU4; A0A072VCU4_MEDTR

Genbank Protein ID

KEH39839.1

Protein Name

Topless-like protein

Genbank Nucleotide ID

CM001217

Gene Name

MTR_1g012820

Ensembl Information

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
MTR_1g012820	KEH39839	KEH39839

Status

Unreviewed

Classification

Family	E-Value	Score	Start	End
E3 adaptor/Cullin RING/DCX/DWD	5.60e-10	40.6	425	455

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Domain Profile

E3 adaptor/Cullin RING/DCX/DWD

   S: 1    gHtdsvtclaf.sd.tllvsGsdDgtikvWD 29
           gH+ +v++laf ++ ++lvs+    +i vWD
   Q: 425  GHSKRVSALAFsNTlNILVSADASPQIIVWD 455
           8**********888999************** PP

Organism

Medicago truncatula

Protein Sequence
(Fasta)

MYNFNEEVLL FFLLHCFTEE GLKETVHTFE RESGLYFDFK YFEEVVLTGR WDEVEKYLSG 60
FTKVEDNNHS IKIYFELRKQ RYFEALDSND QSKAIEILTK DLKVFRSRNE EVFKELTQLL 120

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Nucleotide Sequence
(Fasta)

ATGTATAACT TCAACGAGGA GGTTCTGCTG TTCTTCCTGT TACACTGTTT TACAGAAGAA 60
GGTTTAAAGG AAACAGTACA CACGTATGTC TCTATTTTTC TTCAACTTTG GCAATTCCTA 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0181--Complete proteome
KW-1185--Reference proteome
KW-0677--Repeat
KW-0853--WD repeat

Interpro

IPR006595--CTLH_C
IPR006594--LisH
IPR015943--WD40/YVTN_repeat-like_dom
IPR001680--WD40_repeat
IPR017986--WD40_repeat_dom

PROSITE

PS50897--CTLH
PS50896--LISH
PS50082--WD_REPEATS_2
PS50294--WD_REPEATS_REGION

Pfam

PF00400--WD40

SMART

SM00668--CTLH
SM00320--WD40

KEGG

mtr:MTR_1g012820

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence