iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Protein
Gene
Annotation
Classification
Domain Profile
Function
Protein Sequence
Nucleotide Sequence
Keyword
GO
Orthology
TOP

Tag

Content

iUUCD ID

IUUC-Bol-016021

Ensembl Protein ID

Bo8g099640.1

UniProt Accession

A0A0D3DVL3; A0A0D3DVL3_BRAOL

Protein Name

Uncharacterized protein

Ensembl Information

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
Bo8g099640	Bo8g099640.1	Bo8g099640.1

Status

Unreviewed

Classification

Family	E-Value	Score	Start	End
DUB/USP	5.90e-72	244.2	170	475

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Domain Profile

DUB/USP

   S: 1    tGlkNlgNtCYmNSvLQcLsnipelrellle.kkkeklneenpkepkgellkslqklfeelwkskkkavsprellkalkkeaeefsgyeqqDaqEfl 96
           +Gl+N gN+C+ N vLQcLs +++l  +lle  +k++++++     + ++ +++++ +e   + ++  +sp ++++ l ++  ++   +q+Da+E++
   Q: 170  CGLTNCGNSCFANVVLQCLSWTRPLVAYLLErGHKRECRRN-----DWCFFCEFETHLERA-NMSRFPFSPMNIISRLPNIGGNLGHGRQEDAHELM 260
           7******************************7778888776.....56**********999.88999****************************** PP
   S: 97   aflldqleeelkkeknkpkeeeeeedkselsdeaeekkkkknkslisdlFqgqlksqikclecdnvssreepfldlslpvpgkeetkkeslqdcLes 193
           +f++d +++ +         +e++ +       +   +  ++++li+++F+g l+sq+kc  c nvs ++e+++dl+++++g+      sl++cL++
   Q: 261  RFVIDMMQSVC--------LDEFGGE-------KAVPPRAQETTLIQHIFGGLLQSQVKCTVCSNVSDQYENMMDLTVEIHGDAV----SLEECLDQ 338
           ***********........3444444.......68899999*******************************************7....8******* PP
   S: 194  ftkeeelegenkyycekckkkqeaekklklkklPevLilhLkRfsfseeqksrekinkkvefpleLdlspfctspeekqkekkkYeLiavvvHsGsl 290
           ft++e l+g+n y+c++c+++++a k+l++++ P++L++ LkRf    ++++  k+nk++ fp+++dl p+++   e+   ++ Y+L+av+vH   l
   Q: 339  FTAKEWLQGDNLYKCDRCNDYVKACKRLSIRSAPNILTIALKRF----QGGRFGKLNKRIGFPETFDLGPYTSGGGEG---SDVYNLYAVIVHLDML 428
           ********************************************....567889********************6655...79**********9955 PP
   S: 291  ss...GHYvayvknekgkWllfdDskVtevkeeevleetgstaYvlfYkr 337
           +    GHY++yvk+ +g+W+++dDs+V++v+ e+vl+   + aY+l+Y r
   Q: 429  NAsffGHYICYVKDLRGDWYRIDDSEVEKVELEDVLS---QRAYMLLYSR 475
           54455********************************...9*******87 PP

Organism

Brassica oleracea

Protein Sequence
(Fasta)

MHEVGSTWDL NFFTQLVLTL LFLSLGLLFF VKRTAANYFE VGGAPGGFHR RNFMVPPDAA 60
ECSVCGKLST KKCSRCKSVR YCSAECQKSD WNSGHKLQCK VFKSSGSSPV RKDDLDFKAS 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

ATGCATGAAG TAGGATCAAC GTGGGATCTC AATTTCTTCA CGCAGCTCGT ATTGACTCTC 60
CTCTTCCTCT CCCTCGGTCT CCTCTTCTTC GTCAAACGAA CGGCGGCCAA CTACTTCGAG 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0181--Complete proteome
KW-0472--Membrane
KW-1185--Reference proteome
KW-0812--Transmembrane
KW-1133--Transmembrane helix

Interpro

IPR001394--Peptidase_C19_UCH
IPR018200--USP_CS
IPR028889--USP_dom
IPR002893--Znf_MYND

PROSITE

PS00972--USP_1
PS50235--USP_3
PS01360--ZF_MYND_1
PS50865--ZF_MYND_2

Pfam

PF00443--UCH
PF01753--zf-MYND

Gene Ontology

GO:0016021--C:integral component of membrane
GO:0046872--F:metal ion binding
GO:0036459--F:thiol-dependent ubiquitinyl hydrolase activity
GO:0016579--P:protein deubiquitination
GO:0006511--P:ubiquitin-dependent protein catabolic process

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Atr-002997	Amborella trichopoda	57.08	3.00e-154	538.00
IUUC-Mtr-057748	Medicago truncatula	60.90	0.00e+00	652.00
IUUC-Ppa-095936	Physcomitrella patens	64.01	2.00e-131	463.00

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence