iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Protein
Gene
Annotation
Classification
Domain Profile
Function
Protein Sequence
Nucleotide Sequence
Keyword
GO
Orthology
TOP

Tag

Content

iUUCD ID

IUUC-Tca-121521

Ensembl Protein ID

EOY29252

UniProt Accession

A0A061GJD3; A0A061GJD3_THECC

Genbank Protein ID

EOY29251.1; EOY29252.1

Protein Name

Ubiquitin carboxyl-terminal hydrolase 19, putative isoform 1

Genbank Nucleotide ID

CM001887; CM001887

Gene Name

TCM_036844

Ensembl Information

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
TCM_036844	EOY29252	EOY29252

Status

Unreviewed

Classification

Family	E-Value	Score	Start	End
DUB/USP	6.70e-75	253.3	155	460

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Domain Profile

DUB/USP

   S: 1    tGlkNlgNtCYmNSvLQcLsnipelrellle.kkkeklneenpkepkgellkslqklfeelwkskkkavsprellkalkkeaeefsgyeqqDaqEflafll 100
           +Gl N gN+C+ N vLQcL+++++l  +lle  ++++++++     + ++++++q+ +e   +++ + +sp ++l+ l ++  ++   +q+Da+Ef++f +
   Q: 155  CGLLNCGNSCFANVVLQCLVSTRPLVAYLLEkGHRKECRRN-----DWCFMCEFQTHVERS-SQSLHPFSPINILSRLPNIGGNLGYGRQEDAHEFMRFAI 249
           7******************************5566677665.....57**********999.88899********************************** PP
   S: 101  dqleeelkkeknkpkeeeeeedkselsdeaeekkkkknkslisdlFqgqlksqikclecdnvssreepfldlslpvpgkeetkkeslqdcLesftkeeele 201
           d++++ +         +e++ +       +  ++ +++++li+++F+g+l+sq+ c +cd++ss++e+++dl+++++g+ +    sl++cL++ft +e l+
   Q: 250  DTMQSVC--------LDEFGGE-------KAVDPSSQETTLIQHIFGGHLQSQVFCTNCDKISSQYENMMDLTVEIHGDAS----SLEECLDQFTVKEWLH 331
           *******........3344444.......6788999********************************************6....8*************** PP
   S: 202  genkyycekckkkqeaekklklkklPevLilhLkRfsfseeqksrekinkkvefpleLdlspfctspeekqkekkkYeLiavvvHsGslss...GHYvayv 299
           g+n+y+c+ c+++++a k+l+++  P+vL++ LkRf    + ++  k+nk+v+fp++Ldl+p+++++ ++   ++ Y+L+avvvH   l+    GHY++y+
   Q: 332  GDNMYKCDGCNDYVKAWKRLSVRWAPNVLTIALKRF----QSGRFGKLNKRVSFPETLDLTPYMSEDGDD---SNVYKLYAVVVHLDMLNAsffGHYICYI 425
           ************************************....346668********************6665...79**********995554455******* PP
   S: 300  knekgkWllfdDskVtevkeeevleetgstaYvlfYkr 337
           k+  g+W+++dD kVt v+ eevl+   + aY+l+Y r
   Q: 426  KDFCGNWYRIDDCKVTRVESEEVLS---QGAYMLLYSR 460
           *************************...********87 PP

Organism

Theobroma cacao

Protein Sequence
(Fasta)

MHVGGITVDL NWFLQFIFTL FIFALGALHL LKNTASKYFE VDANFDRDQT VPSMPMDPDL 60
SPCAVCSNPA SKKCSRCKSV RYCSSACQQV HWKAGHKTEC KVKSAQTAST KPFLGVALVP 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

AGAGGGAAGA TATGGGAAGA GAAAGATATG GAAAGAACAG CTTTTCAGAA ATATAGAAAA 60
AAGTGAGGGA TTTGGTCTAC ACAAAAAAAG AAAAGGGAGA AGAGTAGTGA AAGATTTTCT 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0181--Complete proteome
KW-0378--Hydrolase
KW-0472--Membrane
KW-1185--Reference proteome
KW-0812--Transmembrane
KW-1133--Transmembrane helix

Interpro

IPR001394--Peptidase_C19_UCH
IPR018200--USP_CS
IPR028889--USP_dom
IPR002893--Znf_MYND

PROSITE

PS00972--USP_1
PS50235--USP_3
PS01360--ZF_MYND_1
PS50865--ZF_MYND_2

Pfam

PF00443--UCH
PF01753--zf-MYND

Gene Ontology

GO:0016021--C:integral component of membrane
GO:0046872--F:metal ion binding
GO:0036459--F:thiol-dependent ubiquitinyl hydrolase activity
GO:0016579--P:protein deubiquitination
GO:0006511--P:ubiquitin-dependent protein catabolic process

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Ata-001055	Aegilops tauschii	62.29	1.00e-153	536.00
IUUC-Atr-002997	Amborella trichopoda	58.52	4.00e-173	600.00
IUUC-Aly-005942	Arabidopsis lyrata	62.41	0.00e+00	638.00
IUUC-Ath-007334	Arabidopsis thaliana	54.41	0.00e+00	700.00
IUUC-Bdi-014660	Brachypodium distachyon	62.53	6.00e-161	560.00
IUUC-Bol-015083	Brassica oleracea	62.04	0.00e+00	657.00
IUUC-Bra-017569	Brassica rapa	56.58	0.00e+00	669.00
IUUC-Gma-042958	Glycine max	61.64	0.00e+00	766.00
IUUC-Hvu-047620	Hordeum vulgare	64.49	5.00e-166	577.00
IUUC-Lpe-051385	Leersia perrieri	59.48	4.00e-144	504.00
IUUC-Mtr-057748	Medicago truncatula	56.10	0.00e+00	756.00
IUUC-Mac-065204	Musa acuminata	65.87	0.00e+00	647.00
IUUC-Oba-075131	Oryza barthii	62.11	3.00e-161	561.00
IUUC-Obr-076763	Oryza brachyantha	68.01	3.00e-173	601.00
IUUC-Ogl-077264	Oryza glaberrima	61.90	6.00e-173	600.00
IUUC-Ogu-078646	Oryza glumaepatula	61.90	4.00e-173	601.00
IUUC-Oin-079613	Oryza indica	59.23	1.00e-162	566.00
IUUC-Olo-080250	Oryza longistaminata	65.77	2.00e-173	602.00
IUUC-Ome-081416	Oryza meridionalis	61.90	2.00e-173	602.00
IUUC-Oni-082102	Oryza nivara	61.70	2.00e-172	598.00
IUUC-Opu-083135	Oryza punctata	67.77	6.00e-172	597.00
IUUC-Oru-084644	Oryza rufipogon	62.11	3.00e-173	601.00
IUUC-Osa-086195	Oryza sativa	61.82	2.00e-163	569.00
IUUC-Ppa-095936	Physcomitrella patens	66.95	3.00e-139	489.00
IUUC-Pop-099611	Populus trichocarpa	56.84	0.00e+00	809.00
IUUC-Ppe-101845	Prunus persica	75.00	0.00e+00	713.00
IUUC-Smo-109625	Selaginella moellendorffii	57.33	4.00e-151	528.00
IUUC-Sit-109798	Setaria italica	63.87	7.00e-176	610.00
IUUC-Sly-111333	Solanum lycopersicum	67.39	0.00e+00	723.00
IUUC-Stu-112696	Solanum tuberosum	66.38	2.00e-135	474.00
IUUC-Sbi-113982	Sorghum bicolor	68.54	1.00e-172	599.00
IUUC-Tae-125225	Triticum aestivum	59.87	1.00e-165	576.00
IUUC-Tur-126423	Triticum urartu	64.34	1.00e-152	533.00
IUUC-Vvi-130927	Vitis vinifera	72.23	0.00e+00	724.00

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence