iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Protein
Gene
Annotation
Classification
Domain Profile
Function
Protein Sequence
Nucleotide Sequence
Keyword
GO
Orthology
TOP

Tag

Content

iUUCD ID

IUUC-Stu-112881

Ensembl Protein ID

PGSC0003DMT400054001

UniProt Accession

M1BVQ7; M1BVQ7_SOLTU

Protein Name

Uncharacterized protein

Ensembl Information

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
PGSC0003DMG400020951	PGSC0003DMT400053999	PGSC0003DMT400053999
PGSC0003DMG400020951	PGSC0003DMT400054001	PGSC0003DMT400054001

Status

Unreviewed

Classification

Family	E-Value	Score	Start	End
E3 activity/RING/PHD	3.50e-08	34.7	192	242

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Domain Profile

E3 activity/RING/PHD

   S: 2    kvClvCgeggedekslveCekCrewfHpaClklsveeelpnsekwiCpkCrs 53
           + C  Cge++++++  + C+ C++wfH +C+k++   + +  +++ Cp+C++
   Q: 192  TLCGACGENYASDEFWIFCDMCERWFHGNCVKIT-PAKAEHIKQYKCPSCSN 242
           67********************************.888888888******86 PP

Organism

Solanum tuberosum

Protein Sequence
(Fasta)

MEGGAAQYNP RTVEEVLKDF TGRRAGMIKA LTTDVEDFYQ QCDPEKENLC LYGYPSEQWE 60
VNLPAEEVPP ELPEPALGIN FARDGMQEKE WLALVAVHSD AWLLSVSFYF GARFGFDRAD 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

TGTTTTCATT TCCACTTCCG TCCAAAATGA TCCAGTATTA TTACGATAAT ACCCCTGTAC 60
ATTATATTCC TTTCGTGCTC AAAAAGTTGT TCAAATTACC TGAATTGAAA CAGGGGCAGG 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0181--Complete proteome
KW-0479--Metal-binding
KW-1185--Reference proteome
KW-0862--Zinc
KW-0863--Zinc-finger

Interpro

IPR021998--Alfin
IPR019786--Zinc_finger_PHD-type_CS
IPR011011--Znf_FYVE_PHD
IPR001965--Znf_PHD
IPR019787--Znf_PHD-finger
IPR013083--Znf_RING/FYVE/PHD

PROSITE

PS01359--ZF_PHD_1
PS50016--ZF_PHD_2

Pfam

PF12165--Alfin
PF00628--PHD

SMART

SM00249--PHD

Gene Ontology

GO:0008270--F:zinc ion binding
GO:0006355--P:regulation of transcription, DNA-templated

KEGG

sot:102597045

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Csv-026156	Ciona savignyi	55.00	6.00e-09	54.70
IUUC-Mtr-057868	Medicago truncatula	68.06	2.00e-84	304.00
IUUC-Pop-099768	Populus trichocarpa	76.38	2.00e-91	327.00
IUUC-Sit-110822	Setaria italica	81.29	4.00e-55	206.00
IUUC-Sly-111628	Solanum lycopersicum	97.57	7.00e-104	368.00
IUUC-Tca-121679	Theobroma cacao	74.31	8.00e-87	311.00
IUUC-Tae-125833	Triticum aestivum	63.81	2.00e-80	290.00

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence