iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Protein
Gene
Annotation
Classification
Domain Profile
Function
Protein Sequence
Nucleotide Sequence
Keyword
GO
Orthology
TOP

Tag

Content

iUUCD ID

IUUC-Mtr-058393

Ensembl Protein ID

AES59302

UniProt Accession

G7IBB8; G7IBB8_MEDTR

Genbank Protein ID

AES59302.1

Protein Name

Transducin/WD-like repeat-protein

Genbank Nucleotide ID

CM001217

Gene Name

MTR_1g017880

Ensembl Information

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
MTR_1g017880	AES59302	AES59302

Status

Unreviewed

Classification

Family	E-Value	Score	Start	End
E3 adaptor/Cullin RING/DCX/DWD	9.80e-22	77.6	207	238

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Domain Profile

E3 adaptor/Cullin RING/DCX/DWD

   S: 4    dsvtclaf.sd.tllvsGsdDgtikvWDlrtg 33
           ++v ++ + +d ++++sGs Dg i++WD ++g
   Q: 207  GRVLSVTWsTDaKFICSGSSDGIIRIWDAKSG 238
           5799****999*****************7766 PP

Organism

Medicago truncatula

Protein Sequence
(Fasta)

MSSKMDKIKV KYQLKNEDWK PSPVTALATS IDGTRVAASR EDGSLELWLV SANTIGWHCQ 60
LTIHGDPNRI VSSLIWSPGG EFPHGRLFSS NIDGSVSFWD LQQLKQTMVL ESTGVSIWKM 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

GAGCAACCGC GCTTAAACCT CAAAACGAAA CCTAACTATG GCCGTCTCGT TGTTCCCCAG 60
TTTCTTCTCT CCCTAATCAA TTCACTCTCA CTTTTTCTTC ACTTCACTTC TTCATAATCT 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0181--Complete proteome
KW-1185--Reference proteome
KW-0853--WD repeat

Interpro

IPR015943--WD40/YVTN_repeat-like_dom
IPR001680--WD40_repeat
IPR019775--WD40_repeat_CS
IPR017986--WD40_repeat_dom

PROSITE

PS00678--WD_REPEATS_1
PS50082--WD_REPEATS_2
PS50294--WD_REPEATS_REGION

Pfam

PF00400--WD40

SMART

SM00320--WD40

KEGG

mtr:MTR_1g017880

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Atr-003076	Amborella trichopoda	49.05	0.00e+00	679.00
IUUC-Aly-006271	Arabidopsis lyrata	51.76	0.00e+00	756.00
IUUC-Ath-007331	Arabidopsis thaliana	52.50	0.00e+00	758.00
IUUC-Bol-016163	Brassica oleracea	51.87	0.00e+00	769.00
IUUC-Bra-017482	Brassica rapa	52.24	0.00e+00	766.00
IUUC-Dre-027460	Danio rerio	22.73	1.00e-33	137.00
IUUC-Dse-031179	Dothistroma septosporum	22.31	5.00e-24	105.00
IUUC-Ggr-040043	Gaeumannomyces graminis	24.21	8.00e-21	95.50
IUUC-Mor-057245	Magnaporthe oryzae	27.63	4.00e-22	99.80
IUUC-Mpo-057446	Magnaporthe poae	25.37	2.00e-20	94.00
IUUC-Ncr-068880	Neurospora crassa	23.52	3.00e-17	83.60
IUUC-Ont-072642	Oreochromis niloticus	24.26	3.00e-36	146.00
IUUC-Obr-076586	Oryza brachyantha	47.81	4.00e-170	591.00
IUUC-Ppa-095599	Physcomitrella patens	39.26	2.00e-84	306.00
IUUC-Pfo-097207	Poecilia formosa	23.01	2.00e-36	147.00
IUUC-Sar-113254	Sorex araneus	24.89	1.00e-13	71.20
IUUC-Sre-114985	Sporisorium reilianum	28.12	1.00e-14	75.10
IUUC-Tru-118733	Takifugu rubripes	22.00	1.00e-30	127.00
IUUC-Vpa-130412	Vicugna pacos	26.14	3.00e-21	96.30
IUUC-Vvi-131256	Vitis vinifera	54.56	0.00e+00	817.00

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence