iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Protein
Gene
Annotation
Classification
Domain Profile
Function
Protein Sequence
Nucleotide Sequence
Keyword
GO
Orthology
TOP

Tag

Content

iUUCD ID

IUUC-Mtr-057641

Ensembl Protein ID

AES59547

UniProt Accession

G7I595; G7I595_MEDTR

Genbank Protein ID

AES59547.1

Protein Name

Transducin/WD40 repeat protein

Genbank Nucleotide ID

CM001217

Gene Name

MTR_1g021590

Ensembl Information

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
MTR_1g021590	AES59547	AES59547

Status

Unreviewed

Classification

Family	E-Value	Score	Start	End
E3 adaptor/Cullin RING/DCX/DWD	3.40e-34	116.8	218	255
UBD/Beta-Prp	3.40e-62	211.7	217	436

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Domain Profile

E3 adaptor/Cullin RING/DCX/DWD

   S: 2    Htdsvtclaf.sd.tllvsGsdDgtikvWDlrtgvllk 37
           H+d v+cl++ +d t+l s+s+D t+kvW++ + ++l 
   Q: 218  HSDAVSCLSLsPDkTYLYSASWDRTVKVWRIADSKCLE 255
           ******************************99999985 PP

UBD/Beta-Prp

   S: 8    hhksvitcvkfspdksllatgsrdgtikvwdvttgkllrslsgheaevtavkfspdgkilvtgseDrtikvw......dlstgkcvhtlkghedsvlslsf 102
           +h++ ++c+  spdk++l ++s+d+t+kvw++ + k+l+s+ +he++v+av + +dg i  +gs D+t+kvw         +  +v  l ++e  v++l++
   Q: 217  KHSDAVSCLSLSPDKTYLYSASWDRTVKVWRIADSKCLESITSHEDAVNAVVCGNDG-IVFSGSADGTVKVWrreprgKATKHVMVKQLLKQECAVTALAI 316
           68999999************************************************9.**************7744333335556666669********** PP
   S: 103  spsgdklvsGshdrtirvwdletgqclee..tlsghdgvvncvvvhpdgnllvsGslDrtvrlWdl..ktgkllrtltgghtdsvyslsfdsng....... 192
           + +g+ +  G +d  ++ w+ +++ +  +  +l+gh+ +v c+++ +  nl++sGs+D+t+ +W+      +++  ltg h+++v++l++++++       
   Q: 317  DSTGSMVYCGASDGLVNFWERDKQFE--HggVLKGHKLAVLCLASAG--NLVFSGSADKTICVWKRdgVIHTCMSVLTG-HDGPVKCLAVEQDResdargd 412
           *******************5555555..455************9999..***************8766899999999*9.*********988888899999 PP
   S: 193  ..kelvsgsldgtvklwdlqtgec 214
               l sgsld++vk+w+++++  
   Q: 413  qrWILYSGSLDKSVKVWSVSESMQ 436
           88899**************95432 PP

Organism

Medicago truncatula

Protein Sequence
(Fasta)

MFGSSRNSSS NGSSNNNNNI PRPQFMQSEP RFSTTEAYTD DDYAMRSSSA ASPMSPYYYD 60
PGRLSGEGSP MMMSPWNQTT NSPFSKPQWS QHEDTPPQNS LIGSLVREEG HIYSLAASGD 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

TTCCGGTGGT TGCGCTGTTT TTTGGTGTCT GAATCGGTGA AAGAGTAACA AACAAACAAA 60
CAAACATCTT GAATGATAGT GAGATAAGAG AGAAAAGAGG ACATCATGTT TGGCAGCAGC 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0181--Complete proteome
KW-1185--Reference proteome
KW-0853--WD repeat

Interpro

IPR020472--G-protein_beta_WD-40_rep
IPR015943--WD40/YVTN_repeat-like_dom
IPR001680--WD40_repeat
IPR017986--WD40_repeat_dom

PROSITE

PS50082--WD_REPEATS_2
PS50294--WD_REPEATS_REGION

Pfam

PF00400--WD40

PRINTS

PR00320--GPROTEINBRPT

SMART

SM00320--WD40

Gene Ontology

GO:0005737--C:cytoplasm
GO:0005634--C:nucleus
GO:0009846--P:pollen germination

KEGG

mtr:MTR_1g021590

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Aml-001971	Ailuropoda melanoleuca	27.14	7.00e-18	85.10
IUUC-Atr-002457	Amborella trichopoda	65.55	7.00e-162	563.00
IUUC-Apl-004098	Anas platyrhynchos	27.14	9.00e-19	87.80
IUUC-Ath-006909	Arabidopsis thaliana	70.95	2.00e-175	607.00
IUUC-Bta-013153	Bos taurus	26.42	3.00e-18	86.30
IUUC-Bdi-014024	Brachypodium distachyon	58.39	1.00e-131	462.00
IUUC-Bra-017125	Brassica rapa	70.63	1.00e-171	595.00
IUUC-Cfa-020036	Canis familiaris	27.14	6.00e-18	85.50
IUUC-Cpo-022194	Cavia porcellus	27.00	1.00e-16	81.30
IUUC-Csa-023363	Chlorocebus sabaeus	27.14	6.00e-18	85.50
IUUC-Cin-025279	Ciona intestinalis	26.85	3.00e-19	90.10
IUUC-Csv-026163	Ciona savignyi	25.50	6.00e-19	88.20
IUUC-Dre-027998	Danio rerio	27.43	3.00e-19	89.70
IUUC-Dor-030750	Dipodomys ordii	26.14	6.00e-18	85.50
IUUC-Fca-035843	Felis catus	27.14	6.00e-18	85.10
IUUC-Fal-037237	Ficedula albicollis	27.14	9.00e-19	88.20
IUUC-Gga-040579	Gallus gallus	27.14	7.00e-19	88.60
IUUC-Gac-042233	Gasterosteus aculeatus	26.55	1.00e-18	87.80
IUUC-Gma-043481	Glycine max	84.25	0.00e+00	726.00
IUUC-Ggo-045147	Gorilla gorilla	27.14	6.00e-18	85.50
IUUC-Hsa-046117	Homo sapiens	27.14	5.00e-18	85.50
IUUC-Hvu-047445	Hordeum vulgare	58.55	4.00e-130	457.00
IUUC-Itr-048899	Ictidomys tridecemlineatus	27.14	6.00e-18	85.50
IUUC-Lpe-051623	Leersia perrieri	60.99	9.00e-128	449.00
IUUC-Loc-052444	Lepisosteus oculatus	27.43	2.00e-19	90.10
IUUC-Laf-053499	Loxodonta africana	27.14	3.00e-18	85.90
IUUC-Mcc-055038	Macaca mulatta	27.14	6.00e-18	85.50
IUUC-Mga-060183	Meleagris gallopavo	27.14	7.00e-19	88.60
IUUC-Mdo-062312	Monodelphis domestica	27.14	2.00e-18	87.40
IUUC-Mmu-063844	Mus musculus	27.14	8.00e-18	85.10
IUUC-Mac-065108	Musa acuminata	51.94	1.00e-101	362.00
IUUC-Mpu-066552	Mustela putorius furo	27.14	7.00e-18	85.10
IUUC-Mlu-067719	Myotis lucifugus	27.14	7.00e-18	85.10
IUUC-Nle-070045	Nomascus leucogenys	26.14	2.00e-18	86.70
IUUC-Opr-070927	Ochotona princeps	27.14	7.00e-18	85.10
IUUC-Ont-072680	Oreochromis niloticus	26.55	8.00e-19	88.60
IUUC-Oba-075783	Oryza barthii	57.79	1.00e-132	466.00
IUUC-Obr-076198	Oryza brachyantha	61.62	7.00e-131	459.00
IUUC-Ogl-077280	Oryza glaberrima	57.79	1.00e-132	466.00
IUUC-Ogu-078924	Oryza glumaepatula	58.47	4.00e-134	470.00
IUUC-Oin-079931	Oryza indica	57.79	1.00e-132	465.00
IUUC-Olo-080744	Oryza longistaminata	59.73	2.00e-111	395.00
IUUC-Oni-082948	Oryza nivara	57.79	1.00e-132	465.00
IUUC-Opu-083881	Oryza punctata	57.56	4.00e-132	464.00
IUUC-Oru-084999	Oryza rufipogon	57.79	1.00e-132	465.00
IUUC-Osa-085749	Oryza sativa	57.79	1.00e-132	465.00
IUUC-Ola-087454	Oryzias latipes	27.14	5.00e-19	89.00
IUUC-Oga-088380	Otolemur garnettii	27.14	5.00e-18	85.50
IUUC-Ptr-091606	Pan troglodytes	27.14	6.00e-18	85.50
IUUC-Pan-092227	Papio anubis	27.14	6.00e-18	85.50
IUUC-Ppa-095309	Physcomitrella patens	47.06	2.00e-77	282.00
IUUC-Pfo-096237	Poecilia formosa	26.84	4.00e-19	89.40
IUUC-Pab-097589	Pongo abelii	27.14	6.00e-18	85.50
IUUC-Pop-099113	Populus trichocarpa	71.09	1.00e-171	595.00
IUUC-Ppe-101858	Prunus persica	71.15	2.00e-174	604.00
IUUC-Pva-102434	Pteropus vampyrus	27.14	6.00e-18	85.50
IUUC-Rno-105443	Rattus norvegicus	27.14	7.00e-18	85.10
IUUC-Sha-106517	Sarcophilus harrisii	27.14	2.00e-18	87.40
IUUC-Sit-109859	Setaria italica	61.96	2.00e-126	445.00
IUUC-Sly-111122	Solanum lycopersicum	64.09	6.00e-160	556.00
IUUC-Stu-112301	Solanum tuberosum	70.82	1.00e-157	548.00
IUUC-Sbi-114260	Sorghum bicolor	61.01	3.00e-132	464.00
IUUC-Ssc-115990	Sus scrofa	26.84	1.00e-17	84.70
IUUC-Tgu-117222	Taeniopygia guttata	27.00	2.00e-17	84.00
IUUC-Tru-118392	Takifugu rubripes	26.84	4.00e-19	89.40
IUUC-Tni-120220	Tetraodon nigroviridis	26.84	3.00e-19	89.40
IUUC-Tca-121208	Theobroma cacao	72.75	2.00e-177	614.00
IUUC-Tae-123171	Triticum aestivum	45.02	5.00e-99	354.00
IUUC-Tur-126539	Triticum urartu	57.81	7.00e-87	313.00
IUUC-Vvi-131140	Vitis vinifera	72.42	7.00e-173	599.00
IUUC-Xtr-132043	Xenopus tropicalis	28.61	1.00e-20	94.40

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence