iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Protein
Gene
Annotation
Classification
Domain Profile
Function
Protein Sequence
Nucleotide Sequence
Keyword
GO
Orthology
TOP

Tag

Content

iUUCD ID

IUUC-Tca-121208

Ensembl Protein ID

EOY14648

UniProt Accession

A0A061FCP4; A0A061FCP4_THECC

Genbank Protein ID

EOY14648.1

Protein Name

Transducin/WD40 repeat-like superfamily protein

Genbank Nucleotide ID

CM001886

Gene Name

TCM_033959

Ensembl Information

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
TCM_033959	EOY14648	EOY14648

Status

Unreviewed

Classification

Family	E-Value	Score	Start	End
E3 adaptor/Cullin RING/DCX/DWD	1.50e-33	114.3	214	251
UBD/Beta-Prp	3.40e-58	198.1	214	440

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Domain Profile

E3 adaptor/Cullin RING/DCX/DWD

   S: 2    Htdsvtclaf.sd.tllvsGsdDgtikvWDlrtgvllk 37
           H+d v+cl++  d +ll s+s+D t+kvW++++ ++l 
   Q: 214  HSDAVSCLSLnVDqGLLYSASWDRTLKVWRISDSKCLE 251
           ***********777*****************9999986 PP

UBD/Beta-Prp

   S: 9    hksvitcvkfspdksllatgsrdgtikvwdvttgkllrslsgheaevtavkfspdgkilvtgseDrtikvwdls......tgkcvhtlkghedsvlslsfs 103
           h++ ++c+    d+ ll ++s+d+t+kvw++++ k+l+s+  h+++v++v  s+ g +  tgs D+ +kvw ++      + +  +tl ++e  v++l+++
   Q: 214  HSDAVSCLSLNVDQGLLYSASWDRTLKVWRISDSKCLESIHAHDDAVNSVVSSKAG-MVFTGSADGSVKVWQMElhrkgtKHTLSQTLLQQECAVTALAIN 313
           788889999999*****************************************999.9*************777777776666667777************ PP
   S: 104  psgdklvsGshdrtirvwdletgqcleetlsghdgvvncvvvhpdgnllvsGslDrtvrlWdl..ktgkllrtltgghtdsvyslsfdsng.......kel 195
             g+++  Gs+d  ++ w+le++     +l+gh+ +v c++  +  nl++sGs+D+t+ +W+   +  ++l  ltg ht++v++l++++++         +
   Q: 314  TPGSVVYCGSSDGLVNFWELEKQLSHGGVLKGHKLAVLCLSAAG--NLVFSGSADKTICVWRRdgNIHTCLSVLTG-HTGPVKCLAVEKDQesgneqrWIV 411
           ********************99999888************9999..***************8877999*******9.*********999999999998889 PP
   S: 196  vsgsldgtvklwdlq....tgecvrtlnghtd 223
            sgsld++vk+w+++     g     ++++++
   Q: 412  YSGSLDKSVKVWSVSefaqIGA---VQQNQQT 440
           9*************95432222...2223333 PP

Organism

Theobroma cacao

Protein Sequence
(Fasta)

MRDAGGGTMF AEADSIPRAK FGNIMHSDPN LSVTAPASDD DLCLRYSSAS AASPAFYEPN 60
RMSGDGSPLT MSPWNQTSPF SKSPWTPFED DNVPANSLIG SLIREEGHIY SLAATKDLLY 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

CTGCATGATT GGATGGTAGC CTGCCTTGGT CTGCAATATG ATTTGTGGAA TTGGTTTTAC 60
AGATAGAAAT TAAAGCAGCC ACCGTACAAA TGACAACAAC CGAGATTGTA ACTAATAAAA 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0181--Complete proteome
KW-1185--Reference proteome
KW-0853--WD repeat

Interpro

IPR020472--G-protein_beta_WD-40_rep
IPR015943--WD40/YVTN_repeat-like_dom
IPR001680--WD40_repeat
IPR017986--WD40_repeat_dom

PROSITE

PS50082--WD_REPEATS_2
PS50294--WD_REPEATS_REGION

Pfam

PF00400--WD40

PRINTS

PR00320--GPROTEINBRPT

SMART

SM00320--WD40

Gene Ontology

GO:0005737--C:cytoplasm
GO:0005634--C:nucleus
GO:0009846--P:pollen germination

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Atr-002457	Amborella trichopoda	66.14	1.00e-171	595.00
IUUC-Ath-006909	Arabidopsis thaliana	74.00	0.00e+00	632.00
IUUC-Bdi-014024	Brachypodium distachyon	59.28	1.00e-134	472.00
IUUC-Bra-017186	Brassica rapa	72.73	2.00e-176	610.00
IUUC-Gma-043481	Glycine max	69.63	1.00e-173	602.00
IUUC-Hvu-047445	Hordeum vulgare	59.39	9.00e-133	466.00
IUUC-Lpe-051623	Leersia perrieri	59.82	1.00e-130	458.00
IUUC-Mtr-057641	Medicago truncatula	72.75	3.00e-174	603.00
IUUC-Oba-075783	Oryza barthii	59.15	7.00e-138	483.00
IUUC-Obr-076198	Oryza brachyantha	58.96	1.00e-134	472.00
IUUC-Ogl-077280	Oryza glaberrima	59.15	7.00e-138	483.00
IUUC-Ogu-078924	Oryza glumaepatula	59.36	1.00e-139	488.00
IUUC-Oin-079931	Oryza indica	59.15	7.00e-138	483.00
IUUC-Olo-080744	Oryza longistaminata	60.00	5.00e-114	403.00
IUUC-Oni-082948	Oryza nivara	59.15	7.00e-138	483.00
IUUC-Opu-083881	Oryza punctata	56.63	2.00e-138	484.00
IUUC-Oru-084999	Oryza rufipogon	59.15	7.00e-138	483.00
IUUC-Osa-085749	Oryza sativa	59.15	7.00e-138	483.00
IUUC-Pop-099814	Populus trichocarpa	75.78	0.00e+00	638.00
IUUC-Ppe-101858	Prunus persica	76.64	0.00e+00	662.00
IUUC-Sit-109859	Setaria italica	58.32	6.00e-127	446.00
IUUC-Sly-111122	Solanum lycopersicum	67.57	3.00e-164	570.00
IUUC-Stu-112301	Solanum tuberosum	68.21	2.00e-163	567.00
IUUC-Sbi-114260	Sorghum bicolor	55.56	5.00e-134	470.00
IUUC-Tur-126539	Triticum urartu	57.32	2.00e-89	321.00

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence