iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Protein
Gene
Annotation
Classification
Domain Profile
Function
Protein Sequence
Nucleotide Sequence
Keyword
GO
Orthology
TOP

Tag

Content

iUUCD ID

IUUC-Pop-099628

Ensembl Protein ID

POPTR_0013s03860.1

UniProt Accession

B9I5F8; B9I5F8_POPTR

Genbank Protein ID

EEE95565.1

Protein Name

Auxin-responsive protein

Genbank Nucleotide ID

CM000349

Gene Name

POPTRDRAFT_823671; POPTR_0013s03860g

Ensembl Information

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
POPTR_0013s03860	POPTR_0013s03860.1	POPTR_0013s03860.1

Status

Unreviewed

Classification

Family	E-Value	Score	Start	End
ULD/UDP/UFD/PB1	1.50e-17	64.6	108	192

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Domain Profile

ULD/UDP/UFD/PB1

   S: 3    rvkvsykgeirsfaldlekpgkfedLlkavrt.lt..........elknsevalkYeDedGDlvtlksDedldkavsllaskksllrlliq 82
            vkvs++g+++++++dl+++ ++ +Llka++  ++          ++++se  ++YeD+dGD++ l++D+++d+++       s++rl+i+
   Q: 108  YVKVSMDGAPYLRKIDLKVYKGYPELLKALEEmFKskvgeysereGYNGSEHVPTYEDKDGDWM-LVGDVPWDMFIN------SCKRLRIM 191
           69******************************6448899999999*******************.************......*******9 PP
   S: 83   k 83
           k
   Q: 192  K 192
           8 PP

Organism

Populus trichocarpa

Functional Description
(View)

Aux/IAA proteins are short-lived transcriptional factors that function as repressors of early auxin response genes at low auxin concentrations.

Protein Sequence
(Fasta)

MEFERDLNLD ATELRLGLPG TATKQSEKQT PNSNLAKSNK RSLPDMNEEP AGSSRENSST 60
VSSNDKKSHD QETAPPIKAQ VVGWPPIRSY RKNCLQAKKL EAEAAGLYVK VSMDGAPYLR 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

ATCTCAGAGT GCTTTACAAC CACACAGGAA ATTAATACAG AGAAGTTAAT TCGCTGCCAC 60
TTTGGAAGAG AAACAAACTT CATTTCATTC AAGATCGTTG AACAAAGAAA CGAAAAGTAT 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0927--Auxin signaling pathway
KW-0181--Complete proteome
KW-0539--Nucleus
KW-1185--Reference proteome
KW-0678--Repressor
KW-0804--Transcription
KW-0805--Transcription regulation

Interpro

IPR033389--AUX/IAA_dom
IPR003311--AUX_IAA
IPR000270--PB1_dom

PROSITE

PS51745--PB1

Pfam

PF02309--AUX_IAA

Gene Ontology

GO:0005634--C:nucleus
GO:0009734--P:auxin-activated signaling pathway
GO:0006355--P:regulation of transcription, DNA-templated
GO:0006351--P:transcription, DNA-templated

KEGG

pop:POPTR_0013s03860g

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Ata-000969	Aegilops tauschii	48.86	4.00e-43	166.00
IUUC-Aly-005805	Arabidopsis lyrata	61.31	4.00e-61	226.00
IUUC-Csa-023469	Chlorocebus sabaeus	30.43	2.20e-01	28.90
IUUC-Mtr-058557	Medicago truncatula	65.48	2.00e-68	250.00
IUUC-Obr-076144	Oryza brachyantha	47.71	8.00e-42	162.00
IUUC-Sit-109772	Setaria italica	52.97	5.00e-49	187.00
IUUC-Sbi-114105	Sorghum bicolor	51.46	3.00e-46	177.00
IUUC-Tca-121147	Theobroma cacao	78.82	3.00e-88	317.00
IUUC-Vvi-131595	Vitis vinifera	71.64	5.00e-75	273.00

Created Date

25-Jun-2017

Functional Description

Protein Fasta Sequence

Nucleotide Fasta Sequence