iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Protein
Gene
Annotation
Classification
Domain Profile
Function
Protein Sequence
Nucleotide Sequence
Keyword
GO
Orthology
TOP

Tag

Content

iUUCD ID

IUUC-Bra-017316

Ensembl Protein ID

Bra034806.1-P

UniProt Accession

M4F160; M4F160_BRARP

Protein Name

RING-type E3 ubiquitin transferase

Ensembl Information

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
Bra034806	Bra034806.1	Bra034806.1-P

Status

Unreviewed

Classification

Family	E-Value	Score	Start	End
E3 activity/RING/U-box	1.20e-30	106.3	9	81

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Domain Profile

E3 activity/RING/U-box

   S: 1    evpeeflCpIslelMrdPvvlpsGitydrssIekwlasggktcPvtrqpl.teedlvPnltlrrliqawceens 73
           e+p +f+CpIsle+M+dPv++ sGitydr+sI +wl++  + cPvt+qpl  ++dl+Pn+ lrrliq+wc en+
   Q: 9    EIPNYFICPISLEIMKDPVTTVSGITYDRQSIVQWLEKVPS-CPVTKQPLpLDSDLTPNHMLRRLIQHWCVENA 81
           69**************************************9.********889999***************997 PP

Organism

Brassica rapa

Protein Sequence
(Fasta)

MDHEEEEIEI PNYFICPISL EIMKDPVTTV SGITYDRQSI VQWLEKVPSC PVTKQPLPLD 60
SDLTPNHMLR RLIQHWCVEN ATRGVVRIPT PRAPPGKPNI IEEIKNLKKF GQEALGKEDT 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

ATGGATCATG AAGAGGAGGA GATCGAGATC CCTAACTACT TTATCTGCCC AATCTCACTA 60
GAAATTATGA AAGATCCAGT CACGACCGTT TCTGGCATCA CTTACGACCG TCAAAGCATC 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0181--Complete proteome
KW-1185--Reference proteome
KW-0808--Transferase

Interpro

IPR011989--ARM-like
IPR016024--ARM-type_fold
IPR003613--Ubox_domain
IPR013083--Znf_RING/FYVE/PHD

PROSITE

PS51698--U_BOX

Pfam

PF04564--U-box

SMART

SM00504--Ubox

Gene Ontology

GO:0004842--F:ubiquitin-protein transferase activity

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Aly-006382	Arabidopsis lyrata	79.01	0.00e+00	689.00
IUUC-Ath-007017	Arabidopsis thaliana	79.17	0.00e+00	705.00
IUUC-Bol-016395	Brassica oleracea	95.72	0.00e+00	877.00
IUUC-Mtr-057873	Medicago truncatula	41.95	6.00e-95	340.00
IUUC-Pop-099498	Populus trichocarpa	46.09	2.00e-102	365.00
IUUC-Ppe-101540	Prunus persica	41.80	1.00e-99	356.00
IUUC-Sly-111043	Solanum lycopersicum	38.29	4.00e-82	298.00

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence