iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Protein
Gene
Annotation
Classification
Domain Profile
Function
Protein Sequence
Nucleotide Sequence
Keyword
GO
Orthology
TOP

Tag

Content

iUUCD ID

IUUC-Stu-112879

Ensembl Protein ID

PGSC0003DMT400015153

UniProt Accession

M1A5J3; M1A5J3_SOLTU

Protein Name

Uncharacterized protein

Ensembl Information

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
PGSC0003DMG400005917	PGSC0003DMT400015153	PGSC0003DMT400015153

Status

Unreviewed

Classification

Family	E-Value	Score	Start	End
E3 adaptor/Cullin RING/DCX/DWD	4.10e-09	37.6	322	358

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Domain Profile

E3 adaptor/Cullin RING/DCX/DWD

   S: 2    Htdsvtclaf.......sd..tllvsGsdDgtikvWD 29
           H  ++t +++       sd   ll++G+ +g++k+W 
   Q: 322  HDTWITTISWslfisdaSDplLLLATGCSNGSVKIWQ 358
           889***********9998855558************6 PP

Organism

Solanum tuberosum

Protein Sequence
(Fasta)

MSSSFQASIL VASPSHPNSV AWSEENLVAV ASGHIVTILN PAKRFGSRGL ITIPPGKPFS 60
VGFIERKDLL SDCMLHIALS RDSSPQEKQY RENRPCVRSI SWSPIGFASN SGCLLAVCTT 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

AAGAAACCTA TTAAACCCCT AAAACCCCAG TTTGCCGAAG CTCTCTAAAT TATCAACGAA 60
GACGCCATTG AAGCATGTAA TTTTATTGTT GAATCGATTC AAGGTAATTA TTTTCAGCAT 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0181--Complete proteome
KW-1185--Reference proteome
KW-0853--WD repeat

Interpro

IPR024761--TFIIIC_delta_N
IPR015943--WD40/YVTN_repeat-like_dom
IPR001680--WD40_repeat
IPR017986--WD40_repeat_dom

PROSITE

PS50082--WD_REPEATS_2
PS50294--WD_REPEATS_REGION

Pfam

PF12657--TFIIIC_delta
PF00400--WD40

SMART

SM00320--WD40

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Atr-003046	Amborella trichopoda	50.00	7.00e-60	224.00
IUUC-Aly-005715	Arabidopsis lyrata	42.66	1.00e-100	359.00
IUUC-Ath-007637	Arabidopsis thaliana	42.58	4.00e-104	371.00
IUUC-Bdi-014902	Brachypodium distachyon	39.39	2.00e-91	329.00
IUUC-Bol-016169	Brassica oleracea	40.85	2.00e-59	222.00
IUUC-Bra-017736	Brassica rapa	42.57	2.00e-102	365.00
IUUC-Gma-044065	Glycine max	46.03	1.00e-113	402.00
IUUC-Hvu-047339	Hordeum vulgare	42.65	2.00e-05	38.90
IUUC-Mtr-058653	Medicago truncatula	47.60	1.00e-112	399.00
IUUC-Mac-065235	Musa acuminata	48.22	1.00e-62	233.00
IUUC-Ogl-077286	Oryza glaberrima	37.01	3.00e-91	328.00
IUUC-Oin-079863	Oryza indica	44.02	9.00e-59	220.00
IUUC-Oru-084242	Oryza rufipogon	53.50	5.00e-46	178.00
IUUC-Osa-085660	Oryza sativa	44.02	1.00e-58	220.00
IUUC-Ppa-095823	Physcomitrella patens	38.25	3.00e-35	142.00
IUUC-Pop-098900	Populus trichocarpa	49.31	1.00e-129	456.00
IUUC-Ppe-101763	Prunus persica	51.73	2.00e-128	452.00
IUUC-Smo-108757	Selaginella moellendorffii	44.08	1.00e-32	134.00
IUUC-Sit-110507	Setaria italica	39.81	5.00e-96	344.00
IUUC-Sly-111401	Solanum lycopersicum	95.02	1.00e-132	465.00
IUUC-Tca-121440	Theobroma cacao	46.52	2.00e-126	445.00
IUUC-Tae-125429	Triticum aestivum	41.33	1.00e-47	183.00
IUUC-Vvi-131537	Vitis vinifera	57.48	2.00e-67	249.00

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence