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Tag Content
UUCD2 ID IUUC-Pop-099988
UUCD1 version UUC-PoT-01035
Ensembl Protein ID POPTR_0002s05280.1
UniProt Accession B9GSM7; B9GSM7_POPTR
Genbank Protein ID EEE80113.1
Protein Name Transducin family protein
Genbank Nucleotide ID CM000338
Gene Name POPTR_0002s05280g
Ensembl Information
Ensembl Gene ID Ensembl Transcript ID Ensembl Protein ID
POPTR_0002s05280 POPTR_0002s05280.1 POPTR_0002s05280.1
Status Unreviewed
Classification
Family E-Value Score Start End
E3 adaptor/Cullin RING/DCX/DWD 1.60e-55 183.6 108 146
UBD/Beta-Prp 3.70e-78 263.8 19 313
Active Site
Position(s) Description Evidence
N/A N/A N/A
Domain Profile

   E3 adaptor/Cullin RING/DCX/DWD

   S: 1    gHtdsvtclaf.sd.tllvsGsdDgtikvWDlrtgvllk 37
    gH+d v+c++f + +l+vsGs D ti++W+++tg++++
   Q: 108 GHSDFVFCVNFnPQsNLIVSGSFDETIRIWEVKTGKCVR 146
    8***********666**********************86 PP
   


   UBD/Beta-Prp

   S: 3    ktlkghhksvitcvkfspdksllatgsrdgtikvwdvttgkllrslsgheaevtavkfspdgkilvtgseDrtikvwdlst.gkcvhtlkg 92
    tl+gh+ +v + vkfs+d++lla++s d+t+++w+ + +l+++l gh+++v+++ +s+d+ ++ ++s+Drt+++wd +t ++c+ +lkg
   Q: 19 RTLRGHERAVSC-VKFSNDGTLLASASLDKTLILWSSPDFSLVHRLIGHSEGVSDLAWSSDSHYICSASDDRTLRIWDARTpFDCLKILKG 108
    578888886655.******************************************************************9637******** PP
   S: 93 hedsvlslsfspsgdklvsGshdrtirvwdletgqcleetlsghdgvvncvvvhpdgnllvsGslDrtvrlWdlktgkllrtltgghtdsv 183
    h+d v +++f+p+++ +vsGs d+tir+w+++tg+c++ + + h+ v++v+++ dg+l+vsGs D+ +++W ++g++l+tl +++++v
   Q: 109 HSDFVFCVNFNPQSNLIVSGSFDETIRIWEVKTGKCVR-VIRAHSMPVTSVHFNRDGSLIVSGSHDGSCKIWEASSGTCLKTLIDDKNPAV 198
    **************************************.********************************************99999*** PP
   S: 184 yslsfdsngkelvsgsldgtvklwdlqtgecvrtlnghtdnvksvrfs...pnderlvsgssDgsiriWdlrsgdllktlqlhnssvisva 271
    ++f++ngk+++ + ld+t+klw+++tg+ ++++ ght+ v+++ + n++++vsgs+D+ +++Wdl++++++++l++h ++ isv+
   Q: 199 SFVKFSPNGKFILVATLDSTLKLWNYSTGKFLKIYSGHTNKVYCITSTfsvTNGKYIVSGSEDKCVYLWDLQQKTMVQKLEGHTDTAISVT 289
    *********************************************988889**************************************** PP
   S: 272 vlsfgdnvlvlgse..dskvniwkl 294
    + ++++n++++++ d++++iw +
   Q: 290 C-HPTENKIASAGLdgDKSIRIWHQ 313
    *.9999999999887899*****85 PP
   

Organism Populus trichocarpa
Protein Sequence
(Fasta)
MASSGSQQTP PYKPYRHIRT LRGHERAVSC VKFSNDGTLL ASASLDKTLI LWSSPDFSLV 60
HRLIGHSEGV SDLAWSSDSH YICSASDDRT LRIWDARTPF DCLKILKGHS DFVFCVNFNP 120
It may take some time, please wait.

Protein Fasta Sequence



>IUUC-Pop-099988|E3,WD_repeat;UBD,Beta-Prp|Populus trichocarpa
Please wait for a moment...
Nucleotide Sequence
(Fasta)
ATCTTCCATT GGAACTTTCA CTTGGGATTT GGTGATGGCC AGCAGTGGAT CGCAACAGAC 60
ACCACCATAC AAACCGTACA GGCACATACG AACCCTGAGG GGCCACGAGC GAGCAGTCTC 120
It may take some time, please wait.

Nucleotide Fasta Sequence



>IUUC-Pop-099988|E3,WD_repeat;UBD,Beta-Prp|Populus trichocarpa
Please wait for a moment...
Sequence Source Ensembl
Keyword

KW-0181--Complete proteome
KW-1185--Reference proteome
KW-0853--WD repeat

Interpro

IPR020472--G-protein_beta_WD-40_rep
IPR015943--WD40/YVTN_repeat-like_dom
IPR001680--WD40_repeat
IPR019775--WD40_repeat_CS
IPR017986--WD40_repeat_dom

PROSITE

PS00678--WD_REPEATS_1
PS50082--WD_REPEATS_2
PS50294--WD_REPEATS_REGION

Pfam

PF00400--WD40

PRINTS

PR00320--GPROTEINBRPT

SMART

SM00320--WD40

KEGG pop:POPTR_0002s05280g
Orthology
iUUCD ID Species Identity E-value Score
IUUC-Ata-000502 Aegilops tauschii 64.09 4.00e-110 390.00
IUUC-Atr-002924 Amborella trichopoda 73.25 6.00e-127 446.00
IUUC-Aly-005655 Arabidopsis lyrata 80.00 9.00e-152 528.00
IUUC-Ath-007545 Arabidopsis thaliana 77.99 2.00e-150 524.00
IUUC-Bdi-014642 Brachypodium distachyon 64.13 3.00e-118 417.00
IUUC-Bol-015533 Brassica oleracea 76.83 1.00e-147 515.00
IUUC-Bra-017641 Brassica rapa 78.29 9.00e-147 512.00
IUUC-Fso-038211 Fusarium solani 38.93 1.00e-46 181.00
IUUC-Gma-042658 Glycine max 78.55 9.00e-147 511.00
IUUC-Laf-053472 Loxodonta africana 62.42 1.00e-107 382.00
IUUC-Mtr-058429 Medicago truncatula 79.67 5.00e-137 479.00
IUUC-Oba-075292 Oryza barthii 67.00 5.00e-116 409.00
IUUC-Obr-076723 Oryza brachyantha 66.01 2.00e-114 404.00
IUUC-Ogl-077247 Oryza glaberrima 64.84 3.00e-116 410.00
IUUC-Ogu-078143 Oryza glumaepatula 64.01 6.00e-116 409.00
IUUC-Oin-080203 Oryza indica 63.69 3.00e-115 407.00
IUUC-Ome-082003 Oryza meridionalis 63.78 3.00e-115 407.00
IUUC-Oni-082216 Oryza nivara 63.69 3.00e-115 407.00
IUUC-Oru-084935 Oryza rufipogon 63.81 1.00e-115 409.00
IUUC-Osa-085444 Oryza sativa 64.01 7.00e-116 409.00
IUUC-Pma-094749 Petromyzon marinus 33.44 1.00e-38 153.00
IUUC-Ppe-101291 Prunus persica 82.91 2.00e-159 554.00
IUUC-Sit-110579 Setaria italica 65.25 2.00e-117 415.00
IUUC-Sly-111880 Solanum lycopersicum 77.12 4.00e-129 453.00
IUUC-Stu-112051 Solanum tuberosum 75.49 2.00e-127 447.00
IUUC-Sbi-113874 Sorghum bicolor 64.42 1.00e-118 419.00
IUUC-Tca-121324 Theobroma cacao 87.34 5.00e-162 562.00
IUUC-Tae-124942 Triticum aestivum 66.67 3.00e-119 421.00
IUUC-Vvi-131551 Vitis vinifera 76.19 2.00e-142 497.00
IUUC-Yli-134418 Yarrowia lipolytica 39.86 2.00e-65 242.00
Created Date 25-Jun-2017

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