iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Protein
Gene
Annotation
Classification
Domain Profile
Function
Protein Sequence
Nucleotide Sequence
Keyword
GO
Orthology
TOP

Tag

Content

iUUCD ID

IUUC-Gma-042820

Ensembl Protein ID

GLYMA02G01620.1

UniProt Accession

I1JBG5; I1JBG5_SOYBN

Genbank Protein ID

KRH69223.1

Protein Name

Uncharacterized protein

Genbank Nucleotide ID

CM000835

Gene Name

LOC100796497; GLYMA_02G012900

Ensembl Information

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
GLYMA02G01620	GLYMA02G01620.1	GLYMA02G01620.1

Status

Unreviewed

Classification

Family	E-Value	Score	Start	End
E3 adaptor/Cullin RING/DCX/DWD	2.50e-24	85.9	326	359
UBD/Beta-Prp	1.20e-43	151.0	238	502

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Domain Profile

E3 adaptor/Cullin RING/DCX/DWD

   S: 1    gHtdsvtclaf.sd..tllvsGsdDgtikvWDlr 31
           gHt+ v+ + f ++    l+s+sdDgt+++WD r
   Q: 326  GHTGAVNTITFsPSviYQLLSSSDDGTCRIWDAR 359
           8**********9665888**************66 PP

UBD/Beta-Prp

   S: 3    ktlkghhksvitcvkfspdksllatgsrdgtikvwdvttgkllrslsgheaevtavkfspdgkilvtgseDrtikvwdlstgkcvhtlkgheds 96
           k+l+gh+ +v +   f  +++++++gs+d+ +k+w+++t  +l+s  ghe+ +t++  s++  + +++s+D +i+vw l +g ++++l+gh+  
   Q: 238  KKLRGHRVAVYC-AIFDGSGRYVISGSDDRLVKIWSMETAFCLASCRGHEGDITDLAVSSNNALVASASNDFVIRVWRLPDGMPISVLRGHTGA 330
           667777776666.8999***************************************************************************** PP
   S: 97   vlslsfspsg.dklvsGshdrtirvwdletgqclee.......................tlsghdgvvncvvvhpdgnllvsGslDrtvrlWdl 166
           v +++fsps  + l+s s+d t r+wd ++    +                         + +++  v c +++ +g ++v+Gs D+  r+W+ 
   Q: 331  VNTITFSPSViYQLLSSSDDGTCRIWDARNSHNPRIyvprppdaingkgnappaslpssSNVQQSYQVLCCAYNANGTVFVTGSSDTYARVWSA 424
           ********777********************9999899*******************9988888999**************************9 PP
   S: 167  ......ktgkllrtl..tgghtdsvyslsfdsng..........................kelvsgsldgtvklwdlq 210
                   ++ ++++   +gh+++v+ ++f+  +                            +v++s+dg+ ++w  +
   Q: 425  lkpntdDAEQPIHEMdlLSGHENDVNYVQFSGCSvaskiltsdpwkeentlkfrnfwychDNIVTCSRDGSAIIWVPR 502
           ***99989999999899556*********99988999999999999999**************************766 PP

Organism

Glycine max

Protein Sequence
(Fasta)

MDSRKGKASV SASSLSAAPL SVSNKVDQMV SPPRDVRAVE TDVDIDLREI YFLIMHFLSV 60
GPCHRTFLNF KEELLEHQLL PRRYHAWFSR SGEPSGDDAD EDDDGISLPL DYSNLVGRYP 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

CCGAAATCTC GAAATCTTAT TAGCTGCCCC AAACGCCAGA TTTTTGTAAC CTTTGCAGTC 60
TTTGGCAATT TTTACTTTTC TAGCATAGTT AAACGTATTT TGACAAAATA ATATTTATAA 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0181--Complete proteome
KW-1185--Reference proteome
KW-0853--WD repeat

Interpro

IPR001487--Bromodomain
IPR015943--WD40/YVTN_repeat-like_dom
IPR001680--WD40_repeat
IPR019775--WD40_repeat_CS
IPR017986--WD40_repeat_dom

PROSITE

PS00678--WD_REPEATS_1
PS50082--WD_REPEATS_2
PS50294--WD_REPEATS_REGION

Pfam

PF00400--WD40

SMART

SM00320--WD40

Gene Ontology

GO:0005634--C:nucleus
GO:0007010--P:cytoskeleton organization
GO:0008360--P:regulation of cell shape
GO:0006357--P:regulation of transcription from RNA polymerase II promoter

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Ath-006577	Arabidopsis thaliana	63.81	0.00e+00	1163.00
IUUC-Mtr-057637	Medicago truncatula	72.70	0.00e+00	2249.00
IUUC-Tsy-119003	Tarsius syrichta	28.98	8.00e-59	223.00

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence