iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Protein
Gene
Annotation
Classification
Domain Profile
Function
Protein Sequence
Nucleotide Sequence
Keyword
GO
Orthology
TOP

Tag

Content

iUUCD ID

IUUC-Mtr-057634

Ensembl Protein ID

KEH44040

UniProt Accession

A0A072W178; A0A072W178_MEDTR

Genbank Protein ID

KEH44040.1

Protein Name

Transducin/WD-like repeat-protein

Genbank Nucleotide ID

CM001217

Gene Name

MTR_1g106905

Ensembl Information

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
MTR_1g106905	KEH44040	KEH44040

Status

Unreviewed

Classification

Family	E-Value	Score	Start	End
E3 adaptor/Cullin RING/DCX/DWD	4.30e-12	47.2	601	634

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Domain Profile

E3 adaptor/Cullin RING/DCX/DWD

   S: 2    Htdsvtclaf..sd.tllvsGsdDgtikvWDlrt 32
           H + ++ ++f  ++  +++++s D  +k+WDlr+
   Q: 601  HRGHINVVKFanHSpSIFATSSFDQDVKMWDLRQ 634
           788899999*97334789*************987 PP

Organism

Medicago truncatula

Protein Sequence
(Fasta)

MAVDILTLEN RYIDSCRRHG VLPHAAILSS FFKAEGKKSH QELIVLDILI DELKDIDFAP 60
LLEICTSLDT TEVEAVDVHN ESPCVLSGEY VLPLMRAVKQ KLRIVELRDM SFAKDFVRDI 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

GAAAAAACTG GAAAACCGAA AAAACAAATA GAAAAAACTG TATGAGACTG AATACCTCAA 60
TAAAAAAAAA ACTCTGAACC CGTGGTTTTC ATTGCGACGC ATATAACACT CTTCTTATCC 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0181--Complete proteome
KW-1185--Reference proteome
KW-0853--WD repeat

Interpro

IPR032675--L_dom-like
IPR003603--U2A'_phosphoprotein32A_C
IPR015943--WD40/YVTN_repeat-like_dom
IPR001680--WD40_repeat
IPR017986--WD40_repeat_dom

PROSITE

PS50082--WD_REPEATS_2
PS50294--WD_REPEATS_REGION

SMART

SM00446--LRRcap
SM00320--WD40

Gene Ontology

GO:0080008--C:Cul4-RING E3 ubiquitin ligase complex
GO:0071493--P:cellular response to UV-B

KEGG

mtr:MTR_1g106905

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Aly-005966	Arabidopsis lyrata	53.77	0.00e+00	769.00
IUUC-Ath-007257	Arabidopsis thaliana	52.97	0.00e+00	752.00
IUUC-Bol-016080	Brassica oleracea	53.83	0.00e+00	818.00
IUUC-Bra-017152	Brassica rapa	53.46	0.00e+00	811.00
IUUC-Cme-027163	Cyanidioschyzon merolae	34.33	4.00e-69	256.00
IUUC-Gma-044343	Glycine max	79.13	0.00e+00	1240.00
IUUC-Mac-065375	Musa acuminata	51.23	0.00e+00	748.00
IUUC-Ppa-095407	Physcomitrella patens	52.22	9.00e-150	523.00
IUUC-Pop-099900	Populus trichocarpa	64.39	0.00e+00	1041.00
IUUC-Ppe-101596	Prunus persica	67.45	0.00e+00	941.00
IUUC-Smo-108795	Selaginella moellendorffii	48.03	1.00e-128	452.00
IUUC-Sly-111655	Solanum lycopersicum	58.28	0.00e+00	858.00
IUUC-Stu-111974	Solanum tuberosum	58.26	0.00e+00	848.00
IUUC-Tca-121812	Theobroma cacao	63.22	0.00e+00	1014.00

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence