iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Protein
Gene
Annotation
Classification
Domain Profile
Function
Protein Sequence
Nucleotide Sequence
Keyword
GO
Orthology
TOP

Tag

Content

iUUCD ID

IUUC-Mtr-057644

Ensembl Protein ID

KEH43430

UniProt Accession

A0A072VZF6; A0A072VZF6_MEDTR

Genbank Protein ID

KEH43430.1

Protein Name

Plant poly(A)+ RNA export protein

Genbank Nucleotide ID

CM001217

Gene Name

MTR_1g492860

Ensembl Information

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
MTR_1g492860	KEH43430	KEH43430

Status

Unreviewed

Classification

Family	E-Value	Score	Start	End
E3 adaptor/Cullin RING/DCX/DWD	9.90e-25	87.0	110	148

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Domain Profile

E3 adaptor/Cullin RING/DCX/DWD

   S: 2    Htdsvtclaf.sd.tllvsGsdDgtikvWDlrtgvllks 38
           H +++  +a+ ++ + l++Gs+D+tik WD+r+++++++
   Q: 110  HDGPIKEIAWiPEmNVLATGSWDKTIKYWDTRQQNPVHT 148
           9999*******999*******************999875 PP

Organism

Medicago truncatula

Protein Sequence
(Fasta)

MSSFGATNTN PNKSHEVTSP PSDSVSSLSF SPKANFLIAT SWDNQVLCWE VSKNGNTLSS 60
TPKASISHDQ PVLCSAWKDD GTTVFTGSCD KQVKMWPLLS GGQPTTVAVH DGPIKEIAWI 120

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Nucleotide Sequence
(Fasta)

ATGTCGAGTT TCGGAGCCAC GAATACCAAT CCTAACAAAT CCCATGAGGT TACTTCACCA 60
CCTTCTGATT CTGTTTCCAG TCTTTCTTTC AGTCCCAAAG CCAATTTCCT CATTGCTACT 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0181--Complete proteome
KW-1185--Reference proteome
KW-0853--WD repeat

Interpro

IPR020472--G-protein_beta_WD-40_rep
IPR015943--WD40/YVTN_repeat-like_dom
IPR001680--WD40_repeat
IPR017986--WD40_repeat_dom

PROSITE

PS50082--WD_REPEATS_2
PS50294--WD_REPEATS_REGION

Pfam

PF00400--WD40

PRINTS

PR00320--GPROTEINBRPT

SMART

SM00320--WD40

KEGG

mtr:MTR_1g492860

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence