iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Protein
Gene
Annotation
Classification
Domain Profile
Function
Protein Sequence
Nucleotide Sequence
Keyword
GO
Orthology
TOP

Tag

Content

iUUCD ID

IUUC-Tca-121523

Ensembl Protein ID

EOY30457

UniProt Accession

A0A061GMR6; A0A061GMR6_THECC

Genbank Protein ID

EOY30457.1

Protein Name

Transducin family protein / WD-40 repeat family protein

Genbank Nucleotide ID

CM001887

Gene Name

TCM_037659

Ensembl Information

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
TCM_037659	EOY30457	EOY30457

Status

Unreviewed

Classification

Family	E-Value	Score	Start	End
E3 adaptor/Cullin RING/DCX/DWD	4.10e-23	81.4	328	358

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Domain Profile

E3 adaptor/Cullin RING/DCX/DWD

   S: 2    Htdsvtclaf..sd.tllvsGsdDgtikvWD 29
           H+++ +c+++  +d +l+++Gs D+t++++D
   Q: 328  HNADLHCVDWnpHDdNLILTGSADNTVRMFD 358
           999********9445***************9 PP

Organism

Theobroma cacao

Protein Sequence
(Fasta)

MESPQSQQQQ QQQQQGPKKR GRKPKPKDEK EQQQQQQQQS AGKMKEGKKA QQPSVDEKYT 60
QWKSLVPVLY DWLANHNLVW PSLSCRWGPQ LEQATYKNRQ RLYLSEQTDG SVPNTLVIAN 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

GGGTCCCCGG AAACCAATCG TTGTTTTTTT CCTTTCTTTC TTTGCTTTTA AAGTCGCAGC 60
AACACTCCCA ATCTCAAAAA TGGAGTCTCC CCAATCTCAA CAGCAACAGC AGCAGCAGCA 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0181--Complete proteome
KW-0539--Nucleus
KW-1185--Reference proteome
KW-0677--Repeat
KW-0853--WD repeat

Interpro

IPR022052--Histone-bd_RBBP4_N
IPR015943--WD40/YVTN_repeat-like_dom
IPR001680--WD40_repeat
IPR017986--WD40_repeat_dom

PROSITE

PS50082--WD_REPEATS_2
PS50294--WD_REPEATS_REGION

Pfam

PF12265--CAF1C_H4-bd
PF00400--WD40

SMART

SM00320--WD40

Gene Ontology

GO:0005634--C:nucleus

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Ata-000914	Aegilops tauschii	75.91	0.00e+00	661.00
IUUC-Atr-003045	Amborella trichopoda	82.13	0.00e+00	766.00
IUUC-Aly-006131	Arabidopsis lyrata	87.15	0.00e+00	843.00
IUUC-Ath-007494	Arabidopsis thaliana	87.31	0.00e+00	841.00
IUUC-Bdi-014938	Brachypodium distachyon	78.02	0.00e+00	738.00
IUUC-Bol-015960	Brassica oleracea	85.50	0.00e+00	833.00
IUUC-Bra-017112	Brassica rapa	85.90	0.00e+00	835.00
IUUC-Gma-044151	Glycine max	89.93	0.00e+00	864.00
IUUC-Hvu-047149	Hordeum vulgare	75.34	2.00e-56	210.00
IUUC-Lpe-051595	Leersia perrieri	71.55	0.00e+00	631.00
IUUC-Mtr-057993	Medicago truncatula	88.39	0.00e+00	837.00
IUUC-Mac-065523	Musa acuminata	82.79	0.00e+00	646.00
IUUC-Oba-075959	Oryza barthii	71.13	0.00e+00	639.00
IUUC-Obr-076021	Oryza brachyantha	78.34	0.00e+00	726.00
IUUC-Ogl-077211	Oryza glaberrima	77.45	0.00e+00	718.00
IUUC-Ogu-078314	Oryza glumaepatula	67.30	8.00e-170	589.00
IUUC-Oin-079269	Oryza indica	78.96	0.00e+00	727.00
IUUC-Olo-080631	Oryza longistaminata	67.39	0.00e+00	635.00
IUUC-Oni-082416	Oryza nivara	73.04	0.00e+00	664.00
IUUC-Opu-083571	Oryza punctata	67.78	2.00e-173	601.00
IUUC-Oru-084902	Oryza rufipogon	72.40	0.00e+00	649.00
IUUC-Osa-085579	Oryza sativa	78.96	0.00e+00	727.00
IUUC-Olu-087795	Ostreococcus lucimarinus	40.22	2.00e-86	312.00
IUUC-Ppa-095350	Physcomitrella patens	64.59	6.00e-176	609.00
IUUC-Pop-099959	Populus trichocarpa	90.36	0.00e+00	859.00
IUUC-Ppe-101724	Prunus persica	90.15	0.00e+00	840.00
IUUC-Sit-110597	Setaria italica	79.04	0.00e+00	729.00
IUUC-Sly-111411	Solanum lycopersicum	81.00	0.00e+00	746.00
IUUC-Stu-112285	Solanum tuberosum	83.57	9.00e-172	595.00
IUUC-Sbi-114341	Sorghum bicolor	77.51	0.00e+00	716.00
IUUC-Tae-125281	Triticum aestivum	76.47	0.00e+00	728.00
IUUC-Tur-126763	Triticum urartu	75.45	0.00e+00	654.00
IUUC-Vvi-131384	Vitis vinifera	79.00	0.00e+00	729.00

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence