iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Protein
Gene
Annotation
Classification
Domain Profile
Function
Protein Sequence
Nucleotide Sequence
Keyword
GO
Orthology
TOP

Tag

Content

iUUCD ID

IUUC-Sbi-113938

Ensembl Protein ID

Sb03g002980.1

UniProt Accession

C5XLW7; C5XLW7_SORBI

Genbank Protein ID

EES00131.1

Protein Name

Uncharacterized protein

Genbank Nucleotide ID

CM000762

Gene Name

SORBI_003G032000

Ensembl Information

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
Sb03g002980	Sb03g002980.1	Sb03g002980.1

Status

Unreviewed

Classification

Family	E-Value	Score	Start	End
E3 adaptor/Cullin RING/BCR/BTB_Other: BTB	1.70e-08	35.5	62	138

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Domain Profile

E3 adaptor/Cullin RING/BCR/BTB_Other: BTB

   S: 5    lvvg.geeffahkivLaasSsvFyalf......lmele.esksklmveikd.......vqpevfrallkFlYtgkld 66
           + v      ++h++vL+a+S+++++ f      ++e + +++ +++ve++d       v +e++r ++++lY+g++ 
   Q: 62   IAVPgAPDLRVHRCVLCARSPFLRDVFarraasDGEEKdKGRDRGKVELRDllgdeveVGYEALRLVVDYLYSGRVA 138
           5555466789*****************7666553333335588*******77788999****************985 PP

Organism

Sorghum bicolor

Protein Sequence
(Fasta)

MEPMESQLTA VALSDSDSAS VEGAAAADAA DADLQALRRL SDNLAAAFRS PDDYGFLSDA 60
RIAVPGAPDL RVHRCVLCAR SPFLRDVFAR RAASDGEEKD KGRDRGKVEL RDLLGDEVEV 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

CTCGCTCGCT AGGCGCTAGG CGCTAGCTCG CTTCGACTTC GTCGCTGTGC GGCTTCCCCA 60
CCATCTCCGG CACGCCTGCC GCCACCCCCA GCCAATGGAG CCCATGGAAA GCCAGCTGAC 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0040--ANK repeat
KW-0181--Complete proteome
KW-1185--Reference proteome

Interpro

IPR002110--Ankyrin_rpt
IPR020683--Ankyrin_rpt-contain_dom
IPR000210--BTB/POZ_dom
IPR021094--NPR1/NIM1-like_C
IPR024228--NPR_central_dom
IPR011333--SKP1/BTB/POZ

PROSITE

PS50297--ANK_REP_REGION
PS50088--ANK_REPEAT
PS50097--BTB

Pfam

PF00651--BTB
PF11900--DUF3420
PF12313--NPR1_like_C

SMART

SM00248--ANK
SM00225--BTB

Gene Ontology

GO:0005737--C:cytoplasm
GO:0005634--C:nucleus
GO:0042742--P:defense response to bacterium
GO:0050832--P:defense response to fungus
GO:0080027--P:response to herbivore

KEGG

sbi:SORBI_03g002980

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Atr-002638	Amborella trichopoda	57.22	3.00e-162	564.00
IUUC-Aly-006379	Arabidopsis lyrata	48.78	7.00e-127	446.00
IUUC-Ath-007248	Arabidopsis thaliana	47.23	8.00e-122	429.00
IUUC-Bdi-014610	Brachypodium distachyon	78.31	0.00e+00	829.00
IUUC-Bol-016455	Brassica oleracea	47.81	3.00e-129	454.00
IUUC-Bra-016815	Brassica rapa	47.62	3.00e-128	451.00
IUUC-Dre-027796	Danio rerio	31.58	1.00e-05	43.90
IUUC-Gma-042806	Glycine max	53.92	1.00e-149	522.00
IUUC-Mtr-057702	Medicago truncatula	55.06	9.00e-159	552.00
IUUC-Mac-065648	Musa acuminata	66.55	0.00e+00	703.00
IUUC-Opu-083512	Oryza punctata	80.57	0.00e+00	845.00
IUUC-Pop-098879	Populus trichocarpa	59.40	8.00e-169	586.00
IUUC-Ppe-102019	Prunus persica	56.98	3.00e-164	570.00
IUUC-Smo-109514	Selaginella moellendorffii	38.76	2.00e-78	285.00
IUUC-Sit-110617	Setaria italica	83.36	0.00e+00	844.00
IUUC-Sly-111592	Solanum lycopersicum	61.03	1.00e-176	612.00
IUUC-Tca-121782	Theobroma cacao	60.98	0.00e+00	634.00
IUUC-Tae-125492	Triticum aestivum	75.27	0.00e+00	762.00
IUUC-Vvi-131096	Vitis vinifera	62.66	0.00e+00	628.00

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence