iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Protein
Gene
Annotation
Classification
Domain Profile
Function
Protein Sequence
Nucleotide Sequence
Keyword
GO
Orthology
TOP

Tag

Content

iUUCD ID

IUUC-Mtr-057887

Ensembl Protein ID

KEH38060

UniProt Accession

A0A072VIS3; A0A072VIS3_MEDTR

Genbank Protein ID

KEH38060.1

Protein Name

Cleavage stimulation factor 50 kDa subunit

Genbank Nucleotide ID

CM001218

Gene Name

MTR_2g060475

Ensembl Information

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
MTR_2g060475	KEH38060	KEH38060

Status

Unreviewed

Classification

Family	E-Value	Score	Start	End
E3 adaptor/Cullin RING/DCX/DWD	2.80e-08	35.2	9	41

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Domain Profile

E3 adaptor/Cullin RING/DCX/DWD

   S: 9    laf..sd..tllvsGsdDgtikvWDlrtgvllk 37
           l+f  ++  ++++s++ D tik+W++ +g+l+k
   Q: 9    LHFwqPTllWFVLSCGKDSTIKLWEVGSGRLVK 41
           565587777889****************99987 PP

Organism

Medicago truncatula

Protein Sequence
(Fasta)

MINLRKRELH FWQPTLLWFV LSCGKDSTIK LWEVGSGRLV KQYLGAIHTQ LRCQAIFNAT 60
EEFILSIDEL NNEVIIWDAM TTEIVAKWPS NHVGAPRWLE HSPVESAFIS CGTDRSIRFW 120

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Nucleotide Sequence
(Fasta)

ATGATTAACC TGCGAAAGAG GGAGCTTCAT TTTTGGCAAC CCACGCTATT GTGGTGAGTT 60
GGATTGACTC GCACCCCAGA GCCTTTAACA ATTTTCCGTG AACATTGTGT TTACTAATCA 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0181--Complete proteome
KW-1185--Reference proteome
KW-0853--WD repeat

Interpro

IPR015943--WD40/YVTN_repeat-like_dom
IPR001680--WD40_repeat
IPR019775--WD40_repeat_CS
IPR017986--WD40_repeat_dom

PROSITE

PS00678--WD_REPEATS_1
PS50082--WD_REPEATS_2
PS50294--WD_REPEATS_REGION

Pfam

PF00400--WD40

KEGG

mtr:MTR_2g060475

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence