• HOME
  • BROWSE
  • SEARCH
  • LINK
  • DOWNLOAD
  • USER GUIDE
  • Protein
  • Gene
  • Annotation
  • Details
  • Classification
  • Domain Profile
  • Function
  • Protein Sequence
  • Nucleotide Sequence
  • Keyword
  • GO
  • Orthology
  • TOP

Basic Information Integrated Annotations

Tag Content
iUUCD ID IUUC-Ath-007599
UUCD1 version UUC-ArT-01615
Ensembl Protein ID AT1G17110.2
UniProt Accession Q9FPS9; Q9SHG9; UBP15_ARATH
Genbank Protein ID AAG42756.1; AAD50020.1; AEE29542.1; ANM60192.1
Protein Name Ubiquitin carboxyl-terminal hydrolase 15; Deubiquitinating enzyme 15; Ubiquitin thioesterase 15; Ubiquitin-specific-processing protease 15
Genbank Nucleotide ID AF302665; AC007651; CP002684; CP002684
Gene Name UBP15; At1g17110; F20D23.20
Ensembl Information
Ensembl Gene ID Ensembl Transcript ID Ensembl Protein ID
AT1G17110 AT1G17110.1 AT1G17110.1
AT1G17110 AT1G17110.2 AT1G17110.2
Annotation
Single Nucleotide Polymorphisms (SNP)
dbSNP
mRNA Expression
GEO
DNA & RNA Element
TRANSFAC
Protein-protein Interaction
iRefIndexMentha
Protein Expression/Proteomics
Status Reviewed
Details
Family Domain References (PMIDs)
DUB/USP USP 18485060
Classification
Family E-value Score Start End
DUB/USP 4.20e-78 263.8 443 747
Active Site
Position(s) Description Evidence
447 Nucleophile ECO:0000255|PROSITE-ProRule:PRU10092}
703 Proton acceptor ECO:0000255|PROSITE-ProRule:PRU10092}
Domain Profile

   DUB/USP

   S: 2    GlkNlgNtCYmNSvLQcLsnipelrellle.kkkeklneenpkepkgellkslqklfeelwkskkkavsprellkalkkeaeefsgyeqqDaqEflaf 98
    Gl N gN+CY N+vLQ+L+ +++l +ll+ +++++++ +++ +l+++l++ + l ++ + s +++l+++++++ ++ +q+Da+Efl+
   Q: 443 GLVNCGNSCYANAVLQSLTCTKPLVAYLLRrSHSRSCS-----GKDWCLMCELEQHVMML-RESGGPLSASRILSHMRSINCQIGDGSQEDAHEFLRL 534
    9*****************************44455554.....6678**********766.9999********************************* PP
   S: 99 lldqleeelkkeknkpkeeeeeedkselsdeaeekkkkknkslisdlFqgqlksqikclecdnvssreepfldlslpvpgkeetkkeslqdcLesftk 196
    l+ ++++ + ++l e + ++ ++++l++++F+g+l+s++kcl+cd++s+r+e+ +dl+l++ g e slqd+L +ft+
   Q: 535 LVASMQSIC---------------LERLGGETKVDPRLQETTLVQHMFGGRLRSKVKCLRCDHESERYENIMDLTLEIYGWVE----SLQDALTQFTR 613
    *********...............22344556788999******************************************996....8********** PP
   S: 197 eeelegenkyycekckkkqeaekklklkklPevLilhLkRfsfseeqksrekinkkvefpleLdlspfctspeekqkekkkYeLiavvvHsGsls... 291
    +e l+gen+y c++c ++++a+k+l++++ P++L++ LkRf ++++ kink+++fp++Ld+ pf+t++ ++ + Y L+av+vH +l+
   Q: 614 PEDLDGENMYRCSRCAGYVRARKELSIHEAPNILTIVLKRF----QEGRYGKINKCISFPEMLDMIPFMTRTG-DV--PPLYMLYAVIVHLDTLNasf 704
    *****************************************....458889********************44.44..9***********99766445 PP
   S: 292 sGHYvayvknekgkWllfdDskVtevkeeevleetgstaYvlfYkr 337
    sGHY++yvk+ +g+W+++dDs++++v++++v + + aY+lfY+r
   Q: 705 SGHYISYVKDLRGNWYRIDDSEIHPVPMTQVMS---EGAYMLFYMR 747
    8********************************...********98 PP
   

Organism Arabidopsis thaliana
Functional Description
(View)

Functional Description



     Recognizes and hydrolyzes the peptide bond at the C-terminal Gly of ubiquitin. Involved in the processing of poly-ubiquitin precursors as well as that of ubiquitinated proteins (By similarity).
Recognizes and hydrolyzes the peptide bond at the C-terminal Gly of ubiquitin. Involved in the processing of poly-ubiquitin precursors as well as that of ubiquitinated proteins (By similarity).
Protein Sequence
(Fasta)
MLEPRGADIP ILFLVLVVLP VVAYILLGKW SNISEKRVRA NLLAQMAAEE ALRAETVVNA 60
DRGVRFESVA TENRAQRTRT KTVSAGGGAV RAEFDAGARE TVAEQRSDSV TATCGVTVVA 120
It may take some time, please wait.

Protein Fasta Sequence



>IUUC-Ath-007599|DUB,USP|Arabidopsis thaliana
Please wait for a moment...
Nucleotide Sequence
(Fasta)
TTTTGGTTAA TTATTAGTTT ATTTAAAAAC AGCATCCTGA AGGACGGAGA GAGACAGAGT 60
ATGCGAGGAG TGTGAAAACG AAGAGCATAA ACAACACGGG ACGAGGAGAG AGAAACTAGT 120
It may take some time, please wait.

Nucleotide Fasta Sequence



>IUUC-Ath-007599|DUB,USP|Arabidopsis thaliana
Please wait for a moment...
Sequence Source Ensembl
Keyword

KW-0025--Alternative splicing
KW-0181--Complete proteome
KW-0378--Hydrolase
KW-0472--Membrane
KW-0479--Metal-binding
KW-0645--Protease
KW-1185--Reference proteome
KW-0788--Thiol protease
KW-0812--Transmembrane
KW-1133--Transmembrane helix
KW-0833--Ubl conjugation pathway
KW-0862--Zinc
KW-0863--Zinc-finger

Interpro

IPR001394--Peptidase_C19_UCH
IPR018200--USP_CS
IPR028889--USP_dom
IPR002893--Znf_MYND

PROSITE

PS00972--USP_1
PS50235--USP_3
PS01360--ZF_MYND_1
PS50865--ZF_MYND_2

Pfam

PF00443--UCH
PF01753--zf-MYND

Gene Ontology

GO:0016021--C:integral component of membrane
GO:0046872--F:metal ion binding
GO:0036459--F:thiol-dependent ubiquitinyl hydrolase activity
GO:0016579--P:protein deubiquitination
GO:0006511--P:ubiquitin-dependent protein catabolic process

KEGG ath:AT1G17110
Orthology
iUUCD ID Species Identity E-value Score
IUUC-Ata-000426 Aegilops tauschii 69.63 3.00e-141 494.00
IUUC-Atr-003062 Amborella trichopoda 55.69 5.00e-151 527.00
IUUC-Aly-006034 Arabidopsis lyrata 92.94 0.00e+00 1649.00
IUUC-Bdi-014717 Brachypodium distachyon 69.58 5.00e-157 548.00
IUUC-Bol-015616 Brassica oleracea 81.59 0.00e+00 1444.00
IUUC-Bra-017955 Brassica rapa 82.26 0.00e+00 1471.00
IUUC-Gma-043603 Glycine max 47.89 0.00e+00 754.00
IUUC-Lpe-051615 Leersia perrieri 66.75 6.00e-153 534.00
IUUC-Mtr-058164 Medicago truncatula 48.82 0.00e+00 744.00
IUUC-Mac-065271 Musa acuminata 64.88 1.00e-167 582.00
IUUC-Opr-071170 Ochotona princeps 42.70 5.00e-59 222.00
IUUC-Oba-075960 Oryza barthii 59.33 1.00e-155 543.00
IUUC-Obr-076330 Oryza brachyantha 69.23 1.00e-159 556.00
IUUC-Ogl-077370 Oryza glaberrima 67.43 9.00e-160 556.00
IUUC-Ogu-078615 Oryza glumaepatula 59.29 8.00e-156 543.00
IUUC-Oin-079409 Oryza indica 67.43 2.00e-160 558.00
IUUC-Olo-080550 Oryza longistaminata 59.29 3.00e-156 545.00
IUUC-Ome-081508 Oryza meridionalis 59.56 8.00e-156 543.00
IUUC-Oni-082740 Oryza nivara 59.29 1.00e-155 543.00
IUUC-Opu-083669 Oryza punctata 66.08 4.00e-137 481.00
IUUC-Oru-084502 Oryza rufipogon 59.29 1.00e-155 543.00
IUUC-Osa-085475 Oryza sativa 67.43 9.00e-160 556.00
IUUC-Olu-087767 Ostreococcus lucimarinus 38.66 9.00e-61 226.00
IUUC-Pop-099882 Populus trichocarpa 53.05 0.00e+00 793.00
IUUC-Ppe-101942 Prunus persica 49.46 0.00e+00 796.00
IUUC-Sit-109825 Setaria italica 58.65 2.00e-160 558.00
IUUC-Sly-111027 Solanum lycopersicum 57.30 0.00e+00 679.00
IUUC-Sbi-114225 Sorghum bicolor 58.37 6.00e-162 564.00
IUUC-Tca-121618 Theobroma cacao 49.43 0.00e+00 814.00
IUUC-Tae-123144 Triticum aestivum 69.60 3.00e-145 508.00
IUUC-Tur-126234 Triticum urartu 66.76 3.00e-154 538.00
IUUC-Vvi-131600 Vitis vinifera 50.06 0.00e+00 790.00
Created Date 25-Jun-2017

https://dev.news.makassarkota.go.id/public/pgsoft-demo/ https://jdih.sumbawabaratkab.go.id/lato/pg-soft-demo/ https://dev.news.makassarkota.go.id/public/slot-gacor/ http://pbb.tanahbumbukab.go.id/-/slot-gacor/ slot gacor https://siakad.unipra.ac.id/sass/slot-gacor-x500/ http://kpm.dinus.ac.id/assets/images/berita/slot/
Copyright © 2004-2017.The CUCKOO Workgroup. All Rights Reserved