iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Protein
Gene
Annotation
Classification
Domain Profile
Function
Protein Sequence
Nucleotide Sequence
Keyword
GO
Orthology
TOP

Tag

Content

iUUCD ID

IUUC-Stu-112204

Ensembl Protein ID

PGSC0003DMT400050493

UniProt Accession

M1BQD7; M1BQD7_SOLTU

Protein Name

RING-type E3 ubiquitin transferase

Ensembl Information

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
PGSC0003DMG400019623	PGSC0003DMT400050493	PGSC0003DMT400050493

Status

Unreviewed

Classification

Family	E-Value	Score	Start	End
E3 activity/RING/U-box	1.70e-33	115.7	5	79

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Domain Profile

E3 activity/RING/U-box

   S: 1    evpeeflCpIslelMrdPvvlpsGitydrssIekwlasggk.tcPvtrqplteedlvPnltlrrliqawceenss 74
           ++p++flCpIs+e+MrdPv++++Gitydr++Iekwl s+++ tcPvt+q l+ +dl+Pn+ lrrliq+wc  nss
   Q: 5    DIPSYFLCPISMEVMRDPVTISTGITYDRQNIEKWLFSCKHtTCPVTNQDLKFKDLTPNHNLRRLIQSWCMLNSS 79
           69**********************************888777****************************88875 PP

Organism

Solanum tuberosum

Protein Sequence
(Fasta)

MEEIDIPSYF LCPISMEVMR DPVTISTGIT YDRQNIEKWL FSCKHTTCPV TNQDLKFKDL 60
TPNHNLRRLI QSWCMLNSSN GIQRMPTPKP QVQRAHVVRI LNEAQKYPDM EFSCLRRIKS 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

GTGGAAAATA TGGAGGAAAT TGATATTCCT TCTTATTTTC TATGTCCAAT CTCAATGGAA 60
GTTATGAGGG ATCCAGTTAC AATATCAACT GGAATAACAT ATGATAGACA AAATATCGAA 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0181--Complete proteome
KW-1185--Reference proteome
KW-0808--Transferase

Interpro

IPR011989--ARM-like
IPR016024--ARM-type_fold
IPR003613--Ubox_domain
IPR013083--Znf_RING/FYVE/PHD

PROSITE

PS51698--U_BOX

Pfam

PF04564--U-box

SMART

SM00504--Ubox

Gene Ontology

GO:0004842--F:ubiquitin-protein transferase activity

KEGG

sot:102591309

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Gma-043606	Glycine max	60.20	5.00e-136	476.00
IUUC-Mtr-057893	Medicago truncatula	58.97	3.00e-125	440.00
IUUC-Pop-099941	Populus trichocarpa	61.39	2.00e-152	530.00

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence