iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Protein
Gene
Annotation
Classification
Domain Profile
Function
Protein Sequence
Nucleotide Sequence
Keyword
GO
Orthology
TOP

Tag

Content

iUUCD ID

IUUC-Tur-126169

Ensembl Protein ID

TRIUR3_32335-P1

UniProt Accession

M7ZKN1; M7ZKN1_TRIUA

Genbank Protein ID

EMS60672.1

Protein Name

E3 ubiquitin-protein ligase RHF2A

Genbank Nucleotide ID

KD106165

Gene Name

TRIUR3_32335

Ensembl Information

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
TRIUR3_32335	TRIUR3_32335-T1	TRIUR3_32335-P1

Status

Unreviewed

Classification

Family	E-Value	Score	Start	End
E3 activity/RING/RING	4.80e-06	27.7	23	74

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Domain Profile

E3 activity/RING/RING

   S: 1    CaiCledf..............kdgplvlpCgHvfhadClqkwpglknssskefrCPlC 45
           C+iCle f               d ++v++C+H fh++C+  w       +++ +CP C
   Q: 23   CSICLEAFcdsdpstgptsrllGD-VMVTSCKHDFHLQCILEW------CQRSSQCPMC 74
           ********6655555555444444.999***************......********** PP

Organism

Triticum urartu

Protein Sequence
(Fasta)

MEKLSSAAAF VEGGVQDACD DACSICLEAF CDSDPSTGPT SRLLGDVMVT SCKHDFHLQC 60
ILEWCQRSSQ CPMCWQAISM KDPLSQELLE AVEQEKNVQA DRSRTTAVFR HPMLGHFEVP 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

ATGGAGAAGC TCTCGTCGGC GGCGGCTTTC GTGGAGGGCG GCGTGCAGGA CGCCTGCGAC 60
GACGCCTGCA GCATCTGCCT CGAGGCCTTC TGCGACAGCG ACCCCTCCAC CGGACCTACC 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0181--Complete proteome
KW-0436--Ligase
KW-1185--Reference proteome

Interpro

IPR001841--Znf_RING
IPR013083--Znf_RING/FYVE/PHD
IPR024766--Znf_RING_H2

PROSITE

PS50089--ZF_RING_2

Pfam

PF12678--zf-rbx1

SMART

SM00184--RING

Gene Ontology

GO:0016874--F:ligase activity
GO:0008270--F:zinc ion binding

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Atr-002655	Amborella trichopoda	43.87	5.00e-72	263.00
IUUC-Aly-005899	Arabidopsis lyrata	55.71	2.00e-19	89.00
IUUC-Ath-007279	Arabidopsis thaliana	59.74	7.00e-24	103.00
IUUC-Bol-015999	Brassica oleracea	54.29	9.00e-20	89.70
IUUC-Bra-017518	Brassica rapa	52.63	4.00e-21	94.40
IUUC-Gma-043782	Glycine max	45.85	4.00e-72	263.00
IUUC-Mtr-058591	Medicago truncatula	47.41	5.00e-75	273.00
IUUC-Pno-095103	Phaeosphaeria nodorum	34.62	6.00e-08	49.30
IUUC-Ppa-095795	Physcomitrella patens	37.67	1.00e-44	172.00
IUUC-Pop-099767	Populus trichocarpa	34.50	1.00e-38	153.00
IUUC-Ppe-101489	Prunus persica	44.01	1.00e-68	252.00
IUUC-Pte-104366	Pyrenophora teres	27.47	4.00e-05	41.20
IUUC-Smo-109592	Selaginella moellendorffii	63.27	1.00e-33	133.00
IUUC-Sit-110350	Setaria italica	54.22	4.00e-96	343.00
IUUC-Stu-112642	Solanum tuberosum	66.18	3.00e-51	194.00
IUUC-Sbi-113905	Sorghum bicolor	56.07	5.00e-103	366.00
IUUC-Tca-121041	Theobroma cacao	46.52	2.00e-78	284.00
IUUC-Vvi-131270	Vitis vinifera	38.75	1.00e-23	103.00

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence