iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Protein
Gene
Annotation
Classification
Domain Profile
Function
Protein Sequence
Nucleotide Sequence
Keyword
GO
Orthology
TOP

Tag

Content

iUUCD ID

IUUC-Stu-112791

Ensembl Protein ID

PGSC0003DMT400068048

UniProt Accession

M1CIC7; M1CIC7_SOLTU

Protein Name

Uncharacterized protein

Ensembl Information

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
PGSC0003DMG400026464	PGSC0003DMT400068048	PGSC0003DMT400068048

Status

Unreviewed

Classification

Family	E-Value	Score	Start	End
E3 adaptor/Cullin RING/DCX/DWD	6.50e-29	100.0	391	432
UBD/Beta-Prp	5.10e-52	178.2	212	445

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Domain Profile

E3 adaptor/Cullin RING/DCX/DWD

   S: 1    gHtdsvtcla.f........sd.tllvsGsdDgtikvWDlrt 32
           gH ++++c+a f         d +++++Gs Dg++k+W++r+
   Q: 391  GHRGPIRCVAaFprlvneenEDgCTVCTGSLDGVLKMWRVRR 432
           8********779****999744699**************985 PP

UBD/Beta-Prp

   S: 8    hhksvitcvkfspdksllatgsrdgtikvwdvttgkllrslsgheaevtavkfspdgkilvtgseDrtikvw..dlstgkcvhtlk... 91
           +h ++i+++++  ++++l ++s d+t+kvw++++ k++++++ h+++++++   +dg +l t+s+D+t++vw  ++ +g+  h+l+   
   Q: 212  KHMGPISSLAINISDDILYSASLDRTVKVWRISDLKCIETIQAHNDPINDIVVGDDG-VLYTASDDATVRVWrrNFCSGDRPHSLTvtl 299
           57779999999999999***************************************9.9*************88777777776666666 PP
   S: 92   .ghedsvlslsfspsgdklvsGshdrtirvwdletgqclee.....tlsghdgvvncvvvhpdgnllvsGslDrtvrlWdlktgkllrt 174
            ++ + v +l++  +g +l  G +d +i+ w   +g+ + +      l gh+++v+c++++   n+lvsGs+D+t+r+W  +++++ + 
   Q: 300  pAKCSPVKTLALTTDGGVLYGGCSDGYIHYW--LKGWFSGQlqyggALLGHTHAVMCLASMA--NYLVSGSADSTCRVWFREQQDCQHV 384
           699999999***9999**************9..5555555566789****************..*****************88888777 PP
   S: 175  l....tgghtdsvysls........fdsngkelvsgsldgtvklwdlqtgecvrtlnghtdn 224
                +g h +++++++         +++g  + +gsldg +k+w ++++++ ++ +g ++n
   Q: 385  CvailQG-HRGPIRCVAafprlvneENEDGCTVCTGSLDGVLKMWRVRRTSISDKGKGSSQN 445
           7777587.*********999987665556699****************99998888887766 PP

Organism

Solanum tuberosum

Protein Sequence
(Fasta)

MASPIDLEPP NSLSSSAPSF AIRPDNNNNN HLNNSFLRSL STKEPLNFSE QLPYSPPRLS 60
TSALPSNTYS QPSTPRLSFT LNNPSTKSVD EDHPDFHQTS YRCISSVLKK DGQILSVAVS 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

ATGGCTTCAC CAATAGACCT TGAACCTCCT AATTCACTAT CTTCTTCTGC TCCGTCTTTC 60
GCCATAAGAC CAGATAATAA TAATAATAAT CATCTCAACA ACAGCTTCTT GCGAAGCCTC 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0181--Complete proteome
KW-1185--Reference proteome
KW-0853--WD repeat

Interpro

IPR020472--G-protein_beta_WD-40_rep
IPR015943--WD40/YVTN_repeat-like_dom
IPR001680--WD40_repeat
IPR017986--WD40_repeat_dom

PROSITE

PS50082--WD_REPEATS_2
PS50294--WD_REPEATS_REGION

Pfam

PF00400--WD40

PRINTS

PR00320--GPROTEINBRPT

SMART

SM00320--WD40

KEGG

sot:102601653

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Atr-002624	Amborella trichopoda	46.23	1.00e-94	338.00
IUUC-Gma-043417	Glycine max	63.29	4.00e-149	520.00
IUUC-Mtr-058275	Medicago truncatula	65.08	2.00e-144	504.00
IUUC-Pop-099569	Populus trichocarpa	73.25	2.00e-107	380.00
IUUC-Ppe-101652	Prunus persica	66.90	1.00e-158	551.00
IUUC-Sly-111754	Solanum lycopersicum	97.14	0.00e+00	895.00
IUUC-Tca-121239	Theobroma cacao	68.43	5.00e-159	552.00

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence