iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Protein
Gene
Annotation
Classification
Domain Profile
Function
Protein Sequence
Nucleotide Sequence
Keyword
GO
Orthology
TOP

Tag

Content

iUUCD ID

IUUC-Stu-112588

Ensembl Protein ID

PGSC0003DMT400047178

UniProt Accession

M1BK86; M1BK86_SOLTU

Protein Name

Uncharacterized protein

Ensembl Information

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
PGSC0003DMG400018313	PGSC0003DMT400047178	PGSC0003DMT400047178

Status

Unreviewed

Classification

Family	E-Value	Score	Start	End
ULD/UDP/UBQ/UBQ_Other	9.40e-06	26.7	2	71

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Domain Profile

ULD/UDP/UBQ/UBQ_Other

   S: 3    vtvksldgseltlkvnpsd.tVaeLKekiekklgippeqqrLiykGkiL.eddktLadyglkdgstihll 70
           v++  +++++ltl++np   + ++L  +i+ k++ip  qqrL+ +++ L +    L+d+g+ ++st+ l 
   Q: 2    VFINLPNHKTLTLEINPFVtSLQTLTLEIHLKFHIPITQQRLYSSCRRLlDAEALLSDLGISPNSTLTLH 71
           788899999*********999**********************99777669999*************986 PP

Organism

Solanum tuberosum

Protein Sequence
(Fasta)

MVFINLPNHK TLTLEINPFV TSLQTLTLEI HLKFHIPITQ QRLYSSCRRL LDAEALLSDL 60
GISPNSTLTL HVPLLGGMQA PVAPKARLEF LNTRPPPNYV AGLGRGATGF TTRSDIGPAR 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

TTTGCACCGA CTTGCCTGAT CCAAAAAAAA AGGTGAAATT GTTCTGTTTT TTCAGCTGTC 60
AACGATTTTG CTCAACAACG AACAGTCATG GTGTTCATCA ATCTTCCGAA TCACAAAACC 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0181--Complete proteome
KW-1185--Reference proteome
KW-0802--TPR repeat

Interpro

IPR003107--HAT
IPR010491--PRP1_N
IPR027108--Prp6/Prp1/STA1
IPR013026--TPR-contain_dom
IPR011990--TPR-like_helical_dom
IPR019734--TPR_repeat
IPR029071--Ubiquitin-rel_dom
IPR000626--Ubiquitin_dom

PROSITE

PS50005--TPR
PS50293--TPR_REGION
PS50053--UBIQUITIN_2

Pfam

PF06424--PRP1_N
PF13181--TPR_8

SMART

SM00386--HAT
SM00028--TPR

Gene Ontology

GO:0005634--C:nucleus
GO:0000398--P:mRNA splicing, via spliceosome

KEGG

sot:102599306

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Mtr-058181	Medicago truncatula	40.26	1.00e-12	65.10
IUUC-Mac-065093	Musa acuminata	69.47	0.00e+00	1276.00
IUUC-Ppa-095358	Physcomitrella patens	73.57	0.00e+00	1435.00
IUUC-Ppe-101962	Prunus persica	82.16	0.00e+00	1566.00

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence