iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Protein
Gene
Annotation
Classification
Domain Profile
Function
Protein Sequence
Nucleotide Sequence
Keyword
GO
Orthology
TOP

Tag

Content

iUUCD ID

IUUC-Mtr-057943

Ensembl Protein ID

KEH32994

UniProt Accession

A0A072UT50; A0A072UT50_MEDTR

Genbank Protein ID

KEH32994.1

Protein Name

Zinc finger, C3HC4 type (RING finger) protein

Genbank Nucleotide ID

CM001219

Gene Name

MTR_3g012550

Ensembl Information

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
MTR_3g012550	KEH32994	KEH32994

Status

Unreviewed

Classification

Family	E-Value	Score	Start	End
E3 activity/RING/RING	7.70e-08	34.2	108	150

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Domain Profile

E3 activity/RING/RING

   S: 1    CaiCledf..kdgplvlp.CgHvfhadClqkwpglknssskefrCPlCr 46
           CaiCl+d+  k+  +++p C+H+fhadC+  w       + +++CPlCr
   Q: 108  CAICLTDYlpKETIRCVPdCQHCFHADCVDEW------LKMSATCPLCR 150
           ********99665888888*************......**********8 PP

Organism

Medicago truncatula

Protein Sequence
(Fasta)

MSTAEPPSST TITTTGVGLG YGITIAVSIL VLISTIMLVS YLCVRIKSHG RRDSFHLDIH 60
HQPHTTINSG LAQPGPFIMG LEKPMIESYP KMILGESRRL PKPNGGQCAI CLTDYLPKET 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

GTCTCTCCCA CTCAATTAAC ACATTGTTCT CTTTCACACA AACACACACC ACCACACTTT 60
CTCTCTTCAA ATTTCATACT TTTCTAACCA CAAAAAATTA TACTATTCTC TCATGTCCAC 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0181--Complete proteome
KW-0472--Membrane
KW-1185--Reference proteome
KW-0812--Transmembrane
KW-1133--Transmembrane helix

Interpro

IPR001841--Znf_RING
IPR013083--Znf_RING/FYVE/PHD

PROSITE

PS50089--ZF_RING_2

Pfam

PF13639--zf-RING_2

SMART

SM00184--RING

Gene Ontology

GO:0016021--C:integral component of membrane
GO:0008270--F:zinc ion binding

KEGG

mtr:MTR_3g012550

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Atr-003007	Amborella trichopoda	49.38	4.00e-34	136.00
IUUC-Aly-006029	Arabidopsis lyrata	57.06	2.00e-52	197.00
IUUC-Ath-006726	Arabidopsis thaliana	57.06	3.00e-52	196.00
IUUC-Bol-016361	Brassica oleracea	58.02	5.00e-52	196.00
IUUC-Bra-017863	Brassica rapa	58.02	8.00e-45	171.00
IUUC-Gma-043023	Glycine max	61.18	2.00e-47	181.00
IUUC-Hvu-047604	Hordeum vulgare	36.07	2.00e-19	88.20
IUUC-Lpe-051435	Leersia perrieri	43.21	7.00e-31	125.00
IUUC-Mac-064609	Musa acuminata	51.81	1.00e-37	148.00
IUUC-Oba-075997	Oryza barthii	43.48	9.00e-24	103.00
IUUC-Ogl-077468	Oryza glaberrima	44.17	1.00e-26	114.00
IUUC-Ogu-078964	Oryza glumaepatula	44.10	5.00e-27	114.00
IUUC-Oin-079787	Oryza indica	42.33	7.00e-23	99.40
IUUC-Olo-080986	Oryza longistaminata	41.54	3.00e-17	80.10
IUUC-Ome-081466	Oryza meridionalis	44.17	1.00e-26	115.00
IUUC-Oni-082932	Oryza nivara	44.10	6.00e-27	114.00
IUUC-Opu-083341	Oryza punctata	44.79	2.00e-29	122.00
IUUC-Oru-084454	Oryza rufipogon	42.33	7.00e-23	99.40
IUUC-Ppa-095252	Physcomitrella patens	45.06	7.00e-36	142.00
IUUC-Pop-100049	Populus trichocarpa	61.11	1.00e-45	174.00
IUUC-Ppe-101147	Prunus persica	52.87	1.00e-42	165.00
IUUC-Smo-109669	Selaginella moellendorffii	48.15	1.00e-37	147.00
IUUC-Sly-111274	Solanum lycopersicum	45.75	9.00e-27	112.00

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence