iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Protein
Gene
Annotation
Classification
Domain Profile
Function
Protein Sequence
Nucleotide Sequence
Keyword
GO
Orthology
TOP

Tag

Content

iUUCD ID

IUUC-Ppa-095450

Ensembl Protein ID

PP1S122_27V6.2

UniProt Accession

A9SUX3; A9SUX3_PHYPA

Genbank Protein ID

EDQ64986.1

Protein Name

Predicted protein

Genbank Nucleotide ID

DS545011

Gene Name

PHYPADRAFT_166694

Ensembl Information

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
PP1S122_27V6	PP1S122_27V6.2	PP1S122_27V6.2
PP1S122_27V6	PP1S122_27V6.1	PP1S122_27V6.1

Status

Unreviewed

Classification

Family	E-Value	Score	Start	End
E3 adaptor/Cullin RING/DCX/DWD	2.00e-23	82.2	246	281

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Domain Profile

E3 adaptor/Cullin RING/DCX/DWD

   S: 2    Htdsvtclaf.sd.tllvsGsdDgtikvWDlrtgvl 35
           H++ v++l+   +   l++Gs+Dg+++++D++tg  
   Q: 246  HSAAVSSLCVqEEmSVLATGSRDGSVQICDTSTGEI 281
           99999**999733467***************99975 PP

Organism

Physcomitrella patens

Protein Sequence
(Fasta)

MEHFARGKVK MKAETKTRKA EQSPWGSGAA DVLLLVFVRL PAASLARASA VCTAWHNVVT 60
NCPFVWEKAL EEQRKELKLK LSQSDVKLVS ELDFRTRAAT MYQRAHLVHG KMYCRWWKAH 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

CAAATCGGAG CAATTGCTCA AGTGCGGCGT TTGATTTGTG GGTTCTAATC TATGGTCATT 60
TGGGTCAATT GGGTCGTGAT TTCTTCCACG TCATGGAACA TTTTGCGAGA GGGAAGGTGA 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0181--Complete proteome
KW-1185--Reference proteome
KW-0677--Repeat
KW-0853--WD repeat

Interpro

IPR024977--Apc4_WD40_dom
IPR001810--F-box_dom
IPR015943--WD40/YVTN_repeat-like_dom
IPR001680--WD40_repeat
IPR019775--WD40_repeat_CS
IPR017986--WD40_repeat_dom

PROSITE

PS00678--WD_REPEATS_1
PS50082--WD_REPEATS_2
PS50294--WD_REPEATS_REGION

Pfam

PF12894--ANAPC4_WD40
PF12937--F-box-like

SMART

SM00320--WD40

KEGG

ppp:PHYPADRAFT_166694

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Atr-003151	Amborella trichopoda	27.40	2.00e-41	162.00
IUUC-Aly-005690	Arabidopsis lyrata	25.40	2.00e-41	162.00
IUUC-Ath-006699	Arabidopsis thaliana	24.04	3.00e-37	148.00
IUUC-Bdi-014108	Brachypodium distachyon	26.82	2.00e-39	155.00
IUUC-Bol-015377	Brassica oleracea	26.44	5.00e-40	157.00
IUUC-Bra-016934	Brassica rapa	29.18	2.00e-36	145.00
IUUC-Gma-043394	Glycine max	28.51	2.00e-43	169.00
IUUC-Lpe-051613	Leersia perrieri	27.38	2.00e-37	149.00
IUUC-Mtr-057690	Medicago truncatula	30.45	4.00e-48	184.00
IUUC-Mac-064938	Musa acuminata	27.96	1.00e-34	139.00
IUUC-Oba-075418	Oryza barthii	30.62	4.00e-42	164.00
IUUC-Obr-076882	Oryza brachyantha	28.64	4.00e-43	168.00
IUUC-Ogl-077438	Oryza glaberrima	28.75	2.00e-44	172.00
IUUC-Ogu-078943	Oryza glumaepatula	28.99	3.00e-45	175.00
IUUC-Oin-079069	Oryza indica	28.75	8.00e-45	173.00
IUUC-Olo-080409	Oryza longistaminata	27.68	8.00e-38	150.00
IUUC-Oni-083056	Oryza nivara	28.50	9.00e-44	170.00
IUUC-Opu-084172	Oryza punctata	29.34	9.00e-45	173.00
IUUC-Oru-085030	Oryza rufipogon	28.50	2.00e-44	172.00
IUUC-Osa-085520	Oryza sativa	28.50	2.00e-44	172.00
IUUC-Pop-099796	Populus trichocarpa	28.81	4.00e-46	177.00
IUUC-Ppe-101252	Prunus persica	26.46	3.00e-39	155.00
IUUC-Smo-108718	Selaginella moellendorffii	31.78	6.00e-45	174.00
IUUC-Sit-109830	Setaria italica	28.37	2.00e-43	169.00
IUUC-Sly-111786	Solanum lycopersicum	25.37	6.00e-36	144.00
IUUC-Sbi-114102	Sorghum bicolor	29.66	3.00e-41	162.00
IUUC-Tca-121562	Theobroma cacao	27.27	9.00e-40	157.00
IUUC-Tae-123446	Triticum aestivum	28.90	2.00e-39	155.00
IUUC-Tur-126707	Triticum urartu	23.91	7.00e-18	84.30
IUUC-Vvi-131441	Vitis vinifera	27.73	4.00e-43	168.00

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence