iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Protein
Gene
Annotation
Classification
Domain Profile
Function
Protein Sequence
Nucleotide Sequence
Keyword
GO
Orthology
TOP

Tag

Content

UUCD2 ID

IUUC-Smo-109369

UUCD1 version

Ensembl Protein ID

UniProt Accession

Genbank Protein ID

Protein Name

Putative uncharacterized protein

Genbank Nucleotide ID

GL377599

Gene Name

SELMODRAFT_443499

Ensembl Information

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
SELMODRAFT_443499	EFJ21339	EFJ21339

Status

Unreviewed

Classification

Family	E-Value	Score	Start	End
E3 adaptor/Cullin RING/DCX/DWD	2.60e-28	97.6	91	124

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Domain Profile

E3 adaptor/Cullin RING/DCX/DWD

   S: 2    HtdsvtclafsdtllvsGsdDgtikvWDlrtgvl 35
           H+++v+c+++s ++l++Gs D+t+ vW++++  +
   Q: 91   HSGRVNCCHWSMDTLATGSSDNTVSVWSMDSMQC 124
           **********66899*************877655 PP

Organism

Selaginella moellendorffii

Protein Sequence
(Fasta)

MAEGQRREVL LDDDTLIAIF RLLLPRSLAR CAAVCSQWHR LVTSQLMKDA CSRHGGLVYS 60
DPSRCKEAMI RTEQFDRLLK CNPRVLSSQA HSGRVNCCHW SMDTLATGSS DNTVSVWSMD 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

ATGGCGGAGG GGCAGCGAAG AGAGGTTTTG CTCGACGACG ACACGCTCAT CGCCATTTTT 60
CGGCTGCTGC TGCCGCGATC TCTTGCCAGA TGCGCTGCGG TCTGCTCCCA ATGGTGAGTC 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0181--Complete proteome
KW-1185--Reference proteome
KW-0853--WD repeat

Interpro

IPR001810--F-box_dom
IPR020472--G-protein_beta_WD-40_rep
IPR015943--WD40/YVTN_repeat-like_dom
IPR001680--WD40_repeat
IPR017986--WD40_repeat_dom

PROSITE

PS50082--WD_REPEATS_2
PS50294--WD_REPEATS_REGION

Pfam

PF12937--F-box-like
PF00400--WD40

PRINTS

PR00320--GPROTEINBRPT

SMART

SM00320--WD40

KEGG

smo:SELMODRAFT_443499

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Aly-005690	Arabidopsis lyrata	31.54	6.00e-39	154.00
IUUC-Ath-006699	Arabidopsis thaliana	29.86	2.00e-32	132.00
IUUC-Bdi-014108	Brachypodium distachyon	32.31	2.00e-36	145.00
IUUC-Bol-015377	Brassica oleracea	32.01	9.00e-39	153.00
IUUC-Gma-043394	Glycine max	33.23	2.00e-38	152.00
IUUC-Mtr-057690	Medicago truncatula	31.21	8.00e-36	143.00
IUUC-Oba-075418	Oryza barthii	31.40	1.00e-27	116.00
IUUC-Pop-099796	Populus trichocarpa	28.41	1.00e-31	130.00
IUUC-Sit-109830	Setaria italica	28.34	1.00e-32	133.00
IUUC-Sly-111786	Solanum lycopersicum	26.09	1.00e-27	116.00
IUUC-Sbi-114102	Sorghum bicolor	31.01	1.00e-32	133.00
IUUC-Tca-121562	Theobroma cacao	29.03	2.00e-27	116.00

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence