iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Protein
Gene
Annotation
Classification
Domain Profile
Function
Protein Sequence
Nucleotide Sequence
Keyword
GO
Orthology
TOP

Tag

Content

iUUCD ID

IUUC-Tca-121694

Ensembl Protein ID

EOY11894

UniProt Accession

A0A061FBM7; A0A061FBM7_THECC

Genbank Protein ID

EOY11894.1

Protein Name

Transducin/WD40 repeat-like superfamily protein, putative isoform 1

Genbank Nucleotide ID

CM001885

Gene Name

TCM_030550

Ensembl Information

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
TCM_030550	EOY11896	EOY11896
TCM_030550	EOY11895	EOY11895
TCM_030550	EOY11894	EOY11894

Status

Unreviewed

Classification

Family	E-Value	Score	Start	End
E3 adaptor/Cullin RING/DCX/DWD	8.10e-12	45.9	349	385

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Domain Profile

E3 adaptor/Cullin RING/DCX/DWD

   S: 2    Htdsvtclaf..sd.tllvsGsdDgtikvWDlrtgvl 35
           H +++t+l+      t+lvs+s Dgtik+WD r+ v+
   Q: 349  HDGEITDLSMcqWMiTRLVSASKDGTIKIWDDRKAVP 385
           89999997554336889**************777665 PP

Organism

Theobroma cacao

Protein Sequence
(Fasta)

MASTGNPNQT IPFDMQKFFK PTISNPSAAP TNPQQQNPSA PYPTPSSYPP PSPPFFHPQY 60
HQFYMPPSST AHPNYQSAPQ DAKSLSFPSP PLGPYNAGTQ ILALINSSPQ NPDFPPQNQL 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

GAAAGATCCC TTCTTTTTTT CTTTGTGACA TGGCTTCAAC AGGAAACCCA AATCAAACCA 60
TCCCATTTGA CATGCAGAAA TTCTTCAAAC CCACAATTTC AAACCCATCA GCAGCCCCAA 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0175--Coiled coil
KW-0181--Complete proteome
KW-1185--Reference proteome
KW-0853--WD repeat

Interpro

IPR032401--EDC4_WD40
IPR015943--WD40/YVTN_repeat-like_dom
IPR001680--WD40_repeat
IPR017986--WD40_repeat_dom

PROSITE

PS50082--WD_REPEATS_2
PS50294--WD_REPEATS_REGION

Pfam

PF16529--Ge1_WD40

SMART

SM00320--WD40

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Atr-002815	Amborella trichopoda	47.84	0.00e+00	1165.00
IUUC-Aly-005827	Arabidopsis lyrata	58.20	0.00e+00	1362.00
IUUC-Ath-006603	Arabidopsis thaliana	55.83	0.00e+00	1359.00
IUUC-Bol-015150	Brassica oleracea	55.95	0.00e+00	1216.00
IUUC-Bra-017673	Brassica rapa	56.63	0.00e+00	1236.00
IUUC-Gma-044374	Glycine max	62.99	0.00e+00	1430.00
IUUC-Loc-051778	Lepisosteus oculatus	26.18	6.00e-26	112.00
IUUC-Mtr-057751	Medicago truncatula	62.06	0.00e+00	1334.00
IUUC-Pop-100059	Populus trichocarpa	61.37	0.00e+00	1386.00
IUUC-Pca-100720	Procavia capensis	25.32	2.00e-08	53.90
IUUC-Ppe-101310	Prunus persica	65.98	0.00e+00	1372.00

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence