iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Protein
Gene
Annotation
Classification
Domain Profile
Function
Protein Sequence
Nucleotide Sequence
Keyword
GO
Orthology
TOP

Tag

Content

iUUCD ID

IUUC-Vvi-130965

Ensembl Protein ID

VIT_19s0015g01380.t01

UniProt Accession

F6I592; F6I592_VITVI

Genbank Protein ID

CCB62047.1

Protein Name

Putative uncharacterized protein

Genbank Nucleotide ID

FN596747

Gene Name

VIT_19s0015g01380

Ensembl Information

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
VIT_19s0015g01380	VIT_19s0015g01380.t01	VIT_19s0015g01380.t01

Status

Unreviewed

Classification

Family	E-Value	Score	Start	End
E3 adaptor/Cullin RING/DCX/DWD	2.00e-11	44.3	383	413

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Domain Profile

E3 adaptor/Cullin RING/DCX/DWD

   S: 2    Htdsvtcl...af.sdtllvsGsdDgtikvWD 29
           H ++vt+l   ++ + t+lvs+s Dgtik+W+
   Q: 383  HDGEVTDLsmcQWmT-TRLVSASTDGTIKIWE 413
           899999973325655.99*************6 PP

Organism

Vitis vinifera

Protein Sequence
(Fasta)

MASPGNPNQA AAFDMHKLFK PTSPSPQNPN NLNSSSPFPP SSYPPPPSAS YPPPSGPYSY 60
PPQTSPFHHQ HHYHIPYPQE QLSNMHHQRS VSYPTPLLQP PPHHLAPPNP NPGARLMALL 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

ATGGCGTCCC CTGGAAATCC AAACCAAGCG GCAGCGTTTG ATATGCACAA ACTCTTCAAA 60
CCCACAAGCC CTAGCCCTCA AAACCCTAAC AATCTCAATT CTTCTTCTCC ATTTCCACCC 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0181--Complete proteome
KW-1185--Reference proteome
KW-0853--WD repeat

Interpro

IPR032401--EDC4_WD40
IPR015943--WD40/YVTN_repeat-like_dom
IPR001680--WD40_repeat
IPR017986--WD40_repeat_dom

PROSITE

PS50082--WD_REPEATS_2
PS50294--WD_REPEATS_REGION

Pfam

PF16529--Ge1_WD40

SMART

SM00320--WD40

Gene Ontology

GO:0000932--C:P-body
GO:0031087--P:deadenylation-independent decapping of nuclear-transcribed mRNA

KEGG

vvi:100259985

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Aly-005827	Arabidopsis lyrata	58.87	0.00e+00	1343.00
IUUC-Ath-006603	Arabidopsis thaliana	58.18	0.00e+00	1353.00
IUUC-Bol-015150	Brassica oleracea	56.53	0.00e+00	1230.00
IUUC-Bra-017673	Brassica rapa	57.82	0.00e+00	1256.00
IUUC-Gma-044374	Glycine max	68.74	0.00e+00	1482.00
IUUC-Mtr-057751	Medicago truncatula	66.32	0.00e+00	1408.00
IUUC-Mac-064436	Musa acuminata	55.98	0.00e+00	1274.00
IUUC-Oba-075599	Oryza barthii	52.58	0.00e+00	1187.00
IUUC-Obr-076020	Oryza brachyantha	53.07	0.00e+00	1178.00
IUUC-Ogl-077923	Oryza glaberrima	52.90	0.00e+00	1190.00
IUUC-Ogu-079010	Oryza glumaepatula	52.58	0.00e+00	1177.00
IUUC-Olo-080788	Oryza longistaminata	52.78	0.00e+00	1197.00
IUUC-Ome-081610	Oryza meridionalis	52.75	0.00e+00	1188.00
IUUC-Oni-082533	Oryza nivara	52.75	0.00e+00	1192.00
IUUC-Opu-083811	Oryza punctata	52.87	0.00e+00	1189.00
IUUC-Oru-084729	Oryza rufipogon	52.55	0.00e+00	1191.00
IUUC-Osa-086170	Oryza sativa	52.98	0.00e+00	1192.00
IUUC-Pop-100059	Populus trichocarpa	64.68	0.00e+00	1469.00
IUUC-Ppe-101310	Prunus persica	71.38	0.00e+00	1447.00
IUUC-Sit-110590	Setaria italica	53.14	0.00e+00	1176.00
IUUC-Sly-111353	Solanum lycopersicum	63.29	0.00e+00	1508.00

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence