iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Protein
Gene
Annotation
Classification
Domain Profile
Function
Protein Sequence
Nucleotide Sequence
Keyword
GO
Orthology
TOP

Tag

Content

UUCD2 ID

IUUC-Gma-043502

UUCD1 version

Ensembl Protein ID

UniProt Accession

Genbank Protein ID

Protein Name

Uncharacterized protein

Genbank Nucleotide ID

CM000844

Gene Name

LOC100803278; GLYMA_11G231400

Ensembl Information

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
GLYMA11G35490	GLYMA11G35490.1	GLYMA11G35490.1

Status

Unreviewed

Classification

Family	E-Value	Score	Start	End
E3 activity/RING/RING	5.20e-06	28.5	108	150

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Domain Profile

E3 activity/RING/RING

   S: 1    CaiCledfkdg..plvlp.CgHvfhadClqkwpglknssskefrCPlCr 46
           C+iCl +f+dg  ++vlp C H fh dC+ kw         + +CPlCr
   Q: 108  CCICLGEFRDGekVKVLPaCDHYFHCDCVDKW------LTHHSSCPLCR 150
           ********6655599*****************......9*********8 PP

Organism

Glycine max

Protein Sequence
(Fasta)

MSNPDTRSFN WHYTELDDRD LEIRGRTLFF VIVLFSIILL VTVLFIYTRW VCRYQGRLPT 60
TAFSAAAVHA PPLAPPQGLD PASIKKLPII LHHAPADRDE SAWDETECCI CLGEFRDGEK 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

ATGTCGAACC CAGACACTCG ATCATTCAAT TGGCACTACA CGGAACTCGA TGACAGAGAC 60
CTAGAGATCC GAGGTAGGAC ACTGTTTTTC GTCATCGTAC TCTTCTCCAT TATTCTTCTT 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0181--Complete proteome
KW-0472--Membrane
KW-1185--Reference proteome
KW-0812--Transmembrane
KW-1133--Transmembrane helix

Interpro

IPR001841--Znf_RING
IPR013083--Znf_RING/FYVE/PHD

PROSITE

PS50089--ZF_RING_2

Pfam

PF13639--zf-RING_2

SMART

SM00184--RING

Gene Ontology

GO:0016021--C:integral component of membrane
GO:0061630--F:ubiquitin protein ligase activity
GO:0008270--F:zinc ion binding
GO:0043161--P:proteasome-mediated ubiquitin-dependent protein catabolic process

KEGG

gmx:100803278

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Atr-002564	Amborella trichopoda	44.03	2.00e-22	98.60
IUUC-Aly-006564	Arabidopsis lyrata	43.14	4.00e-30	123.00
IUUC-Lpe-051280	Leersia perrieri	31.25	4.00e-13	67.40
IUUC-Mtr-058498	Medicago truncatula	78.86	5.00e-71	259.00
IUUC-Mac-064429	Musa acuminata	36.48	1.00e-23	101.00
IUUC-Oba-075191	Oryza barthii	37.41	5.00e-19	87.00
IUUC-Obr-076860	Oryza brachyantha	36.88	5.00e-18	84.00
IUUC-Ogl-077584	Oryza glaberrima	37.41	5.00e-19	87.00
IUUC-Ogu-078773	Oryza glumaepatula	37.41	5.00e-19	87.00
IUUC-Oin-080112	Oryza indica	37.67	8.00e-20	89.70
IUUC-Olo-080647	Oryza longistaminata	37.41	5.00e-19	87.40
IUUC-Ome-081611	Oryza meridionalis	38.10	3.00e-19	87.80
IUUC-Oni-082108	Oryza nivara	37.67	8.00e-20	89.70
IUUC-Opu-083607	Oryza punctata	38.12	4.00e-21	94.40
IUUC-Oru-084593	Oryza rufipogon	37.41	5.00e-19	87.00
IUUC-Osa-086279	Oryza sativa	37.41	5.00e-19	87.00
IUUC-Pop-099417	Populus trichocarpa	50.00	1.00e-31	128.00
IUUC-Ppe-101813	Prunus persica	52.23	2.00e-28	118.00
IUUC-Sit-110425	Setaria italica	35.09	4.00e-23	100.00
IUUC-Sly-110981	Solanum lycopersicum	49.37	3.00e-31	127.00
IUUC-Stu-112860	Solanum tuberosum	53.16	1.00e-33	135.00
IUUC-Sbi-114315	Sorghum bicolor	33.53	4.00e-18	84.30
IUUC-Tca-121482	Theobroma cacao	51.52	2.00e-35	142.00

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence