iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Protein
Gene
Annotation
Classification
Domain Profile
Function
Protein Sequence
Nucleotide Sequence
Keyword
GO
Orthology
TOP

Tag

Content

iUUCD ID

IUUC-Stu-112860

Ensembl Protein ID

PGSC0003DMT400040451

UniProt Accession

M1B9X9; M1B9X9_SOLTU

Protein Name

Uncharacterized protein

Ensembl Information

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
PGSC0003DMG400015661	PGSC0003DMT400040451	PGSC0003DMT400040451

Status

Unreviewed

Classification

Family	E-Value	Score	Start	End
E3 activity/RING/RING	8.40e-09	37.1	105	147

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Domain Profile

E3 activity/RING/RING

   S: 1    CaiCledfkdg..plvlp.CgHvfhadClqkwpglknssskefrCPlCr 46
           C+iCl  f+dg  ++vlp C+H +h dC+ +w       +++ +CPlCr
   Q: 105  CCICLGIFQDGdkVKVLPsCQHSYHSDCVDRW------LRNQSSCPLCR 147
           ********55555999999*************......**********8 PP

Organism

Solanum tuberosum

Protein Sequence
(Fasta)

MASSQDSHSF HWEFSEFDDN DFQIRGHTLF FVILLFTIIV IATLFFLYAR WINKFRSPST 60
TDPVGSGTSV HTPPPAPQGL DPIFINDLPI ILHATCSGSS TVIECCICLG IFQDGDKVKV 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

CAATTATGAA CCTACCATTC CATGTCATCT ACAACACCAC GGTACTAACT ACTCATGCTT 60
TCAGATCCAT TCCCATATCT CCCAATAATA TCTCTTCCAC AATGGCATCA TCTCAAGACT 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0181--Complete proteome
KW-0472--Membrane
KW-1185--Reference proteome
KW-0812--Transmembrane
KW-1133--Transmembrane helix

Interpro

IPR001841--Znf_RING
IPR013083--Znf_RING/FYVE/PHD

PROSITE

PS50089--ZF_RING_2

Pfam

PF13639--zf-RING_2

SMART

SM00184--RING

Gene Ontology

GO:0016021--C:integral component of membrane
GO:0008270--F:zinc ion binding

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Atr-002564	Amborella trichopoda	42.68	4.00e-25	106.00
IUUC-Aly-006564	Arabidopsis lyrata	41.18	5.00e-29	119.00
IUUC-Bra-017408	Brassica rapa	38.93	2.00e-22	97.10
IUUC-Gma-043502	Glycine max	49.68	1.00e-39	154.00
IUUC-Mtr-058498	Medicago truncatula	50.00	2.00e-34	137.00
IUUC-Mac-064429	Musa acuminata	39.86	1.00e-23	101.00
IUUC-Oin-080112	Oryza indica	31.85	9.00e-17	78.60
IUUC-Olo-080647	Oryza longistaminata	30.61	1.00e-14	71.20
IUUC-Oni-082108	Oryza nivara	31.85	9.00e-17	78.60
IUUC-Opu-083607	Oryza punctata	32.75	1.00e-20	91.70
IUUC-Pop-099417	Populus trichocarpa	46.77	4.00e-27	112.00
IUUC-Ppe-101813	Prunus persica	48.05	7.00e-27	111.00
IUUC-Sly-110981	Solanum lycopersicum	84.52	1.00e-64	237.00

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence