iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Protein
Gene
Annotation
Classification
Domain Profile
Function
Protein Sequence
Nucleotide Sequence
Keyword
GO
Orthology
TOP

Tag

Content

iUUCD ID

IUUC-Bra-017764

Ensembl Protein ID

Bra000611.1-P

UniProt Accession

M4C8T3; M4C8T3_BRARP

Protein Name

Uncharacterized protein

Ensembl Information

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
Bra000611	Bra000611.1	Bra000611.1-P

Status

Unreviewed

Classification

Family	E-Value	Score	Start	End
E3 adaptor/Cullin RING/DCX/DWD	1.90e-36	123.5	165	202

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Domain Profile

E3 adaptor/Cullin RING/DCX/DWD

   S: 2    Htdsvtclaf.sd.tllvsGsdDgtikvWDlrtgvllk 37
           H d v++la+  d  ll s s+D t+k+W+++++++l 
   Q: 165  HVDAVSGLALsRDgALLYSVSWDRTLKIWRTTDFKCLE 202
           99*********88799*******************986 PP

Organism

Brassica rapa

Protein Sequence
(Fasta)

MIRCHETQED GDWSHEDHQI SISQALHQCI ATLVGHTSSY ISSLTLAGKR LYTGSSDGLV 60
RLWDATSLET LAEASSNGDV ITGERGDGGA VKSLVILADK LFTAHQDHKI RVWKINDVVE 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

ATGATACGAT GTCACGAAAC TCAAGAAGAT GGAGATTGGT CTCATGAAGA TCATCAAATA 60
TCTATTTCGC AGGCACTTCA TCAATGTATC GCTACTCTTG TTGGTCACAC ATCCTCTTAC 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0181--Complete proteome
KW-1185--Reference proteome
KW-0853--WD repeat

Interpro

IPR020472--G-protein_beta_WD-40_rep
IPR015943--WD40/YVTN_repeat-like_dom
IPR001680--WD40_repeat
IPR019775--WD40_repeat_CS
IPR017986--WD40_repeat_dom

PROSITE

PS00678--WD_REPEATS_1
PS50082--WD_REPEATS_2
PS50294--WD_REPEATS_REGION

Pfam

PF00400--WD40

PRINTS

PR00320--GPROTEINBRPT

SMART

SM00320--WD40

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Aly-005752	Arabidopsis lyrata	81.63	1.00e-176	611.00
IUUC-Ath-006904	Arabidopsis thaliana	82.01	8.00e-172	595.00
IUUC-Gma-043098	Glycine max	57.18	7.00e-117	413.00
IUUC-Mtr-058389	Medicago truncatula	56.02	1.00e-101	362.00
IUUC-Pop-099181	Populus trichocarpa	59.27	1.00e-104	373.00
IUUC-Ppe-101853	Prunus persica	58.54	3.00e-114	404.00
IUUC-Sly-111471	Solanum lycopersicum	55.03	4.00e-110	391.00
IUUC-Stu-112792	Solanum tuberosum	54.59	1.00e-106	379.00
IUUC-Tca-121089	Theobroma cacao	59.79	2.00e-121	428.00

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence